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sci-biology/bowtie

Popular short read aligner for Next-generation sequencing data

Screenshots

  • bowtie-2.5.1
    ~amd64 ~x86
    test cpu_flags_x86_sse2 examples python_single_target_python3_10 python_single_target_python3_11 python_single_target_python3_12

    View      Download      Browse     License: GPL-3   
    Overlay: gentoo
  • bowtie-2.4.4
    ~amd64 ~x86
    cpu_flags_x86_sse2 examples +python_single_target_python3_10

    View      Download      Browse     License: GPL-3   
    Overlay: gentoo

USE Flags

test
Global: Workaround to pull in packages needed to run with FEATURES=test. Portage-2.1.2 handles this internally, so don't set it in make.conf/package.use anymore
cpu_flags_x86_sse2
* This flag is undocumented *
examples
Global: Install examples, usually source code
python_single_target_python3_10
* This flag is undocumented *
python_single_target_python3_11
* This flag is undocumented *
python_single_target_python3_12
* This flag is undocumented *
+python_single_target_python3_10
* This flag is undocumented *