gpo.zugaina.org

Search Portage & Overlays:

dev-python/scib

Evaluating single-cell data integration methods

Screenshots

  • scib-1.1.7
    ~amd64 ~x86
    bbknn desc dev docs harmony louvain mnn rpy2 scanorama scgen scvi test trvae trvaep python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 python_targets_python3_14

    View      Download      Browse     License: MIT   
    Overlay: pypi

Runtime Dependencies

scib-1.1.7





dev-python/numpy[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




>=dev-python/pandas-2.0[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/seaborn[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/matplotlib[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/numba[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/scanpy[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/anndata[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/h5py[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/scipy[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/scikit-learn[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/scikit-misc[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/leidenalg[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/umap-learn[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/pydot[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/igraph[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/llvmlite[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]




dev-python/deprecated[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
,python_targets_python3_14
      (-)
?
]

rpy2?
      ( >=dev-python/rpy2-3.0[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

rpy2?
      ( dev-python/anndata2ri[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( dev-python/pytest[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( dev-python/pytest-icdiff[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( dev-python/pytest-cov[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( dev-python/codecov[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/build[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/twine[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/isort[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/bump2version[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/pre-commit[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( dev-python/sphinx[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( dev-python/sphinx-rtd-theme[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( dev-python/myst-parser[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( dev-python/sphinx-automodapi[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

louvain?
      ( dev-python/igraph[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

louvain?
      ( dev-python/louvain[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

bbknn?
      ( dev-python/bbknn[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

scanorama?
      ( dev-python/scanorama[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

mnn?
      ( dev-python/mnnpy[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

scgen?
      ( dev-python/scgen[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

scvi?
      ( dev-python/scvi-tools[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

trvae?
      ( dev-python/trvae[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

trvaep?
      ( dev-python/trvaep[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

desc?
      ( dev-python/desc[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

harmony?
      ( dev-python/harmony-pytorch[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

python_targets_python3_11?
      ( dev-lang/python:3.11 )

python_targets_python3_12?
      ( dev-lang/python:3.12 )

python_targets_python3_13?
      ( dev-lang/python:3.13 )

python_targets_python3_14?
      ( dev-lang/python:3.14 )