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dev-python/schickit

a toolkit for processing single cell Hi-C data

Screenshots

  • schickit-0.0.59
    ~amd64 ~x86
    python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 python_targets_python3_14

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    Overlay: pypi

Runtime Dependencies

schickit-0.0.59





dev-python/numpy[python_targets_python3_11
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<dev-python/pandas-2.0[python_targets_python3_11
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dev-python/cython[python_targets_python3_11
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dev-python/cmake[python_targets_python3_11
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dev-python/pysam[python_targets_python3_11
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dev-python/pairtools[python_targets_python3_11
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dev-python/bioframe[python_targets_python3_11
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dev-python/anndata[python_targets_python3_11
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dev-python/cached-property[python_targets_python3_11
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>=dev-python/chart-studio-1.1.0[python_targets_python3_11
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dev-python/cleanlab[python_targets_python3_11
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>=dev-python/click-8.1.6[python_targets_python3_11
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>=dev-python/cloudpickle-2.2.1[python_targets_python3_11
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dev-python/cooler[python_targets_python3_11
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>=dev-python/h5py-3.7.0[python_targets_python3_11
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dev-python/igraph[python_targets_python3_11
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dev-python/leidenalg[python_targets_python3_11
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>=dev-python/levenshtein-0.21.1[python_targets_python3_11
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>=dev-python/markdown-it-py-3.0.0[python_targets_python3_11
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>=dev-python/markupsafe-2.1.3[python_targets_python3_11
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>=dev-python/matplotlib-3.5.3[python_targets_python3_11
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dev-python/numba[python_targets_python3_11
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>=dev-python/scipy-1.7.0[python_targets_python3_11
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>=dev-python/pandas-1.3.4[python_targets_python3_11
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dev-python/pyyaml[python_targets_python3_11
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dev-python/bioframe[python_targets_python3_11
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dev-python/pysam[python_targets_python3_11
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dev-python/cooltools[python_targets_python3_11
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dev-python/pyBigWig[python_targets_python3_11
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>=dev-python/pyyaml-6.0.1[python_targets_python3_11
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>=dev-python/scikit-learn-1.1.2[python_targets_python3_11
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>=dev-python/scipy-1.9.3[python_targets_python3_11
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>=dev-python/seaborn-0.12.2[python_targets_python3_11
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dev-python/tornado[python_targets_python3_11
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>=dev-python/tqdm-4.65.0[python_targets_python3_11
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dev-python/umap-learn[python_targets_python3_11
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dev-python/HiCMatrix[python_targets_python3_11
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>=dev-python/unidecode-1.3.6[python_targets_python3_11
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dev-python/krbalancing[python_targets_python3_11
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dev-python/scanpy[python_targets_python3_11
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python_targets_python3_11?
      ( dev-lang/python:3.11 )

python_targets_python3_12?
      ( dev-lang/python:3.12 )

python_targets_python3_13?
      ( dev-lang/python:3.13 )

python_targets_python3_14?
      ( dev-lang/python:3.14 )