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dev-python/scarf

Scarf: A scalable tool for single-cell omics data analysis

Screenshots

  • scarf-0.32.3
    ~amd64 ~x86
    extra python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 python_targets_python3_14

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    Overlay: pypi

Runtime Dependencies

scarf-0.32.3





dev-python/dask[python_targets_python3_11
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>=dev-python/h5py-3.3.0[python_targets_python3_11
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dev-python/hnswlib[python_targets_python3_11
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dev-python/importlib-metadata[python_targets_python3_11
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dev-python/joblib[python_targets_python3_11
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dev-python/leidenalg[python_targets_python3_11
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dev-python/loguru[python_targets_python3_11
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~dev-python/networkx-3.4.2[python_targets_python3_11
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dev-python/numba[python_targets_python3_11
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dev-python/numcodecs[python_targets_python3_11
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~dev-python/numpy-1.26.4[python_targets_python3_11
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dev-python/packaging[python_targets_python3_11
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dev-python/pandas[python_targets_python3_11
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dev-python/polars[python_targets_python3_11
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dev-python/pyarrow[python_targets_python3_11
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~dev-python/scikit-learn-1.6.1[python_targets_python3_11
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dev-python/scikit-network[python_targets_python3_11
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~dev-python/scipy-1.15.2[python_targets_python3_11
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dev-python/setuptools[python_targets_python3_11
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dev-python/statsmodels[python_targets_python3_11
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dev-python/threadpoolctl[python_targets_python3_11
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dev-python/tqdm[python_targets_python3_11
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dev-python/umap-learn[python_targets_python3_11
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dev-python/zarr[python_targets_python3_11
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extra?
      ( dev-python/requests[python_targets_python3_11
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,python_targets_python3_13
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extra?
      ( dev-python/gensim[python_targets_python3_11
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extra?
      ( dev-python/kneed[python_targets_python3_11
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extra?
      ( dev-python/matplotlib[python_targets_python3_11
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extra?
      ( dev-python/seaborn[python_targets_python3_11
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extra?
      ( dev-python/cmocean[python_targets_python3_11
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extra?
      ( dev-python/datashader[python_targets_python3_11
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] )

extra?
      ( dev-python/ipython-autotime[python_targets_python3_11
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] )

extra?
      ( dev-python/ipywidgets[python_targets_python3_11
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,python_targets_python3_12
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,python_targets_python3_13
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,python_targets_python3_14
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] )

python_targets_python3_11?
      ( dev-lang/python:3.11 )

python_targets_python3_12?
      ( dev-lang/python:3.12 )

python_targets_python3_13?
      ( dev-lang/python:3.13 )

python_targets_python3_14?
      ( dev-lang/python:3.14 )