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Protein & Interactomic Graph Construction for Machine Learning

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  • graphein-1.7.8
    ~amd64 ~x86
    dev extras python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 python_targets_python3_14

    View      Download      Browse     License: MIT   
    Overlay: pypi

Runtime Dependencies

graphein-1.7.8





dev-python/pandas[python_targets_python3_11
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dev-python/biopandas[python_targets_python3_11
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dev-python/biopython[python_targets_python3_11
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dev-python/bioservices[python_targets_python3_11
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dev-python/cpdb-protein[python_targets_python3_11
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dev-python/cython[python_targets_python3_11
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dev-python/deepdiff[python_targets_python3_11
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dev-python/loguru[python_targets_python3_11
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dev-python/looseversion[python_targets_python3_11
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>=dev-python/matplotlib-3.4.3[python_targets_python3_11
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dev-python/multipledispatch[python_targets_python3_11
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dev-python/networkx[python_targets_python3_11
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<dev-python/numpy-2.0[python_targets_python3_11
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dev-python/pandas[python_targets_python3_11
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dev-python/plotly[python_targets_python3_11
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dev-python/pydantic[python_targets_python3_11
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dev-python/rich[python_targets_python3_11
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dev-python/rich-click[python_targets_python3_11
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dev-python/seaborn[python_targets_python3_11
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>dev-python/pyyaml-5.4.0[python_targets_python3_11
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dev-python/scikit-learn[python_targets_python3_11
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>=dev-python/scipy-1.8[python_targets_python3_11
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dev-python/tqdm[python_targets_python3_11
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dev-python/wget[python_targets_python3_11
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dev-python/xarray[python_targets_python3_11
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dev-python/jaxtyping[python_targets_python3_11
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dev?
      ( dev-python/black[python_targets_python3_11
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dev?
      ( dev-python/flake8[python_targets_python3_11
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dev?
      ( dev-python/hypothesis[python_targets_python3_11
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dev?
      ( dev-python/interrogate[python_targets_python3_11
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dev?
      ( dev-python/isort[python_targets_python3_11
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dev?
      ( dev-python/nbstripout[python_targets_python3_11
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] )

dev?
      ( dev-python/nbval[python_targets_python3_11
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] )

dev?
      ( dev-python/pandoc[python_targets_python3_11
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] )

dev?
      ( dev-python/pre-commit[python_targets_python3_11
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] )

dev?
      ( dev-python/pycodestyle[python_targets_python3_11
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dev?
      ( dev-python/pydocstyle[python_targets_python3_11
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dev?
      ( dev-python/pytest[python_targets_python3_11
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dev?
      ( dev-python/pytest-cov[python_targets_python3_11
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] )

dev?
      ( dev-python/pytest-xdist[python_targets_python3_11
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extras?
      ( dev-python/biovec[python_targets_python3_11
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extras?
      ( dev-python/propy3[python_targets_python3_11
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extras?
      ( dev-python/pyaaisc[python_targets_python3_11
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extras?
      ( dev-python/mpl-chord-diagram[python_targets_python3_11
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,python_targets_python3_12
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extras?
      ( dev-python/rdkit[python_targets_python3_11
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,python_targets_python3_13
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extras?
      ( dev-python/selfies[python_targets_python3_11
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extras?
      ( dev-python/smilite[python_targets_python3_11
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extras?
      ( dev-python/einops[python_targets_python3_11
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] )

extras?
      ( dev-python/foldcomp[python_targets_python3_11
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,python_targets_python3_12
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,python_targets_python3_13
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] )

extras?
      ( dev-python/nest-asyncio[python_targets_python3_11
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,python_targets_python3_13
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] )

python_targets_python3_11?
      ( dev-lang/python:3.11 )

python_targets_python3_12?
      ( dev-lang/python:3.12 )

python_targets_python3_13?
      ( dev-lang/python:3.13 )

python_targets_python3_14?
      ( dev-lang/python:3.14 )