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gnome-extra/gnome-commander
A graphical, full featured, twin-panel file manager
media-libs/gegl
A graph based image processing framework
net-libs/webkit-gtk
Open source web browser engine
app-office/scribus
Desktop publishing (DTP) and layout program
media-gfx/geeqie
A lightweight GTK image viewer forked from GQview
app-editors/kile
Latex Editor and TeX shell based on KDE Frameworks
dev-games/openscenegraph
Open source high performance 3D graphics toolkit
app-text/bibletime
Qt5 Bible study application using the SWORD library.
media-gfx/fim
Fbi IMproved is a framebuffer image viewer
dev-libs/poco
C++ libraries for building network-based applications
sci-libs/gdal
Translator library for raster geospatial data formats (includes OGR support)
www-apps/redmine
Flexible project management web application using the Ruby on Rails framework
app-doc/abs-guide
An in-depth exploration of the art of shell scripting
app-doc/linuxfromscratch
LFS documents building a Linux system entirely from source
mail-client/claws-mail
An email client (and news reader) based on GTK+
media-gfx/pqiv
powerful GTK based command-line image viewer with a minimal UI
media-gfx/blender
3D Creation/Animation/Publishing System
media-gfx/engauge
Convert an image file showing a graph or map into numbers
app-text/xournal
An application for notetaking, sketching, and keeping a journal using a stylus
media-libs/vips
VIPS Image Processing Library
app-editors/tea
Small, lightweight Qt text editor
dev-python/sympy
Computer Algebra System in pure Python
sci-libs/plplot
Multi-language scientific plotting library
sci-libs/mathgl
Math Graphics Library
kde-misc/krename
Powerful batch file renamer
kde-misc/tellico
Collection manager based on KDE Frameworks
sci-biology/embassy-vienna
EMBOSS integrated version of Vienna RNA package - RNA folding
sci-biology/embassy-mse
EMBOSS integrated version of MSE - Multiple Sequence Screen Editor
sci-biology/embassy-signature
EMBOSS integrated version of Protein signature add-on package
sci-biology/embassy-topo
EMBOSS integrated version of Transmembrane protein display
sci-biology/embassy-iprscan
EMBOSS integrated version of InterProScan motif detection add-on package
sci-biology/embassy-hmmer
EMBOSS integrated version of HMMER wrapper - sequence analysis with profile HMMs
sci-biology/embassy-structure
EMBOSS integrated version of Protein structure add-on package
sci-biology/embassy-domalign
EMBOSS integrated version of Protein domain alignment add-on package
sci-biology/embassy-phylipnew
EMBOSS integrated version of The Phylogeny Inference Package
sci-biology/embassy-domainatrix
EMBOSS integrated version of Protein domain analysis add-on package
sci-biology/embassy-emnu
EMBOSS integrated version of Simple menu of EMBOSS applications
sci-biology/embassy-domsearch
EMBOSS integrated version of Protein domain search add-on package
sci-biology/embassy-esim4
EMBOSS integrated version of sim4 - Alignment of cDNA and genomic DNA
sci-biology/embassy-cbstools
EMBOSS integrated version of Applications from the CBS group
sci-biology/emboss
The European Molecular Biology Open Software Suite - A sequence analysis package
app-doc/tldp-howto
The Linux Documentation Project HOWTOs
media-gfx/graphviz
Open Source Graph Visualization Software
sci-libs/fgsl
A Fortran interface to the GNU Scientific Library
net-print/cups-filters
Cups filters
app-office/calligra
KDE Office Suite
app-text/zathura-meta
Meta package for app-text/zathura plugins
app-text/qpdfview
A tabbed document viewer
media-gfx/openscad
The Programmers Solid 3D CAD Modeller
www-apps/webdavcgi
A Perl CGI for accessing and sharing files, or calendar/addressbooks via WebDAV