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sci-biology/deeptools

Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig

Screenshots

  • deeptools-3.5.6
    ~amd64
    doc test python_targets_python3_13

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Runtime Dependencies

deeptools-3.5.6


>=sci-biology/deeptools-intervals-0.1.8[python_targets_python3_13
      (-)
?
]

>=dev-python/numpy-1.9.0[python_targets_python3_13
      (-)
?
]

>=dev-python/numpydoc-0.5[python_targets_python3_13
      (-)
?
]

>=dev-python/scipy-0.17.0[python_targets_python3_13
      (-)
?
]

dev-python/plotly[python_targets_python3_13
      (-)
?
]

>=dev-python/py2bit-0.2.0[python_targets_python3_13
      (-)
?
]

>=dev-python/pyBigWig-0.2.1[python_targets_python3_13
      (-)
?
]

>=sci-biology/pysam-0.14.0[python_targets_python3_13
      (-)
?
]

>=dev-python/matplotlib-3.5.0[python_targets_python3_13
      (-)
?
]

python_targets_python3_13?
      ( dev-lang/python:3.13 )