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Infer tree sequences from genetic variation data.

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  • tsinfer-0.5.0
    ~amd64 ~x86
    dev docs test python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 python_targets_python3_14

    View      Download      Browse     License: GNU GPLv3+   
    Overlay: pypi

Runtime Dependencies

tsinfer-0.5.0





>=dev-python/numpy-1.23.5[python_targets_python3_11
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,python_targets_python3_12
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,python_targets_python3_13
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,python_targets_python3_14
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]




dev-python/six[python_targets_python3_11
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,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




dev-python/tqdm[python_targets_python3_11
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,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




dev-python/humanize[python_targets_python3_11
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,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




dev-python/daiquiri[python_targets_python3_11
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,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




dev-python/tskit[python_targets_python3_11
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,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




dev-python/numcodecs[python_targets_python3_11
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,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




dev-python/zarr[python_targets_python3_11
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,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




dev-python/lmdb[python_targets_python3_11
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,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




dev-python/sortedcontainers[python_targets_python3_11
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,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




>=dev-python/attrs-19.2.0[python_targets_python3_11
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?
,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




dev-python/numba[python_targets_python3_11
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,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]




>=dev-python/psutil-5.9.0[python_targets_python3_11
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?
,python_targets_python3_12
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?
,python_targets_python3_13
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?
,python_targets_python3_14
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?
]

test?
      ( ~dev-python/build-1.2.2_p1[python_targets_python3_11
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      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( ~dev-python/colorama-0.4.6[python_targets_python3_11
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      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
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      ?
,python_targets_python3_14
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      ?
] )

test?
      ( dev-python/daiquiri[python_targets_python3_11
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      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( ~dev-python/humanize-4.12.1[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( ~dev-python/lmdb-1.6.2[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( ~dev-python/matplotlib-3.9.4[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
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      ?
] )

test?
      ( dev-python/meson[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
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      ?
] )

test?
      ( dev-python/msprime[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
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      ?
] )

test?
      ( ~dev-python/pytest-8.3.5[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( ~dev-python/pytest-cov-6.0.0[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( ~dev-python/seaborn-0.13.2[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
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      ?
] )

test?
      ( dev-python/sgkit[python_targets_python3_11
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      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
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      ?
] )

test?
      ( dev-python/tskit[python_targets_python3_11
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      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( ~dev-python/tqdm-4.67.1[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

test?
      ( ~dev-python/twine-6.1.0[python_targets_python3_11
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      ?
,python_targets_python3_12
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      ?
,python_targets_python3_13
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,python_targets_python3_14
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      ?
] )

docs?
      ( dev-python/jupyter-book[python_targets_python3_11
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      ?
,python_targets_python3_12
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      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
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      ?
] )

docs?
      ( ~dev-python/sphinx-issues-5.0.0[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
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      ?
] )

docs?
      ( ~dev-python/sphinx-argparse-0.5.2[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( ~dev-python/humanize-4.12.1[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( ~dev-python/lmdb-1.6.2[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( ~dev-python/tqdm-4.67.1[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( dev-python/daiquiri[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( dev-python/msprime[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( dev-python/sgkit[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( ~dev-python/ipywidgets-8.1.5[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( dev-python/bio[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( dev-python/bio2zarr[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

docs?
      ( dev-python/sphinx-book-theme[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
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      ?
] )

docs?
      ( dev-python/pyfaidx[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/attrs[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/codecov[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/coverage[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/flake8[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/six[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/tqdm[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/humanize[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

dev?
      ( dev-python/daiquiri[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
,python_targets_python3_14
            (-)
      ?
] )

python_targets_python3_11?
      ( dev-lang/python:3.11 )

python_targets_python3_12?
      ( dev-lang/python:3.12 )

python_targets_python3_13?
      ( dev-lang/python:3.13 )

python_targets_python3_14?
      ( dev-lang/python:3.14 )