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dev-python/pypath-omnipath

Molecular signaling prior knowledge processing

Screenshots

  • pypath-omnipath-0.16.20
    ~amd64 ~x86
    graph metabo pathophenodb python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 python_targets_python3_14

    View      Download      Browse     License: GPL-3   
    Overlay: pypi

Runtime Dependencies

pypath-omnipath-0.16.20





dev-python/beautifulsoup4[python_targets_python3_11
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dev-python/dill[python_targets_python3_11
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dev-python/future[python_targets_python3_11
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dev-python/glom[python_targets_python3_11
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dev-python/lxml[python_targets_python3_11
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dev-python/matplotlib[python_targets_python3_11
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dev-python/numpy[python_targets_python3_11
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dev-python/openpyxl[python_targets_python3_11
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dev-python/pandas[python_targets_python3_11
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dev-python/psutil[python_targets_python3_11
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dev-python/pycurl[python_targets_python3_11
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dev-python/pypath-common[python_targets_python3_11
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dev-python/pyreadr[python_targets_python3_11
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dev-python/pyyaml[python_targets_python3_11
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dev-python/rdata[python_targets_python3_11
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dev-python/requests[python_targets_python3_11
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>=dev-python/scipy-1.9.0[python_targets_python3_11
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,python_targets_python3_12
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dev-python/sqlparse[python_targets_python3_11
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dev-python/tabulate[python_targets_python3_11
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dev-python/timeloop[python_targets_python3_11
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dev-python/toml[python_targets_python3_11
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dev-python/tqdm[python_targets_python3_11
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dev-python/xlrd[python_targets_python3_11
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graph?
      ( dev-python/python-igraph[python_targets_python3_11
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pathophenodb?
      ( dev-python/SPARQLWrapper[python_targets_python3_11
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] )

metabo?
      ( dev-python/openbabel[python_targets_python3_11
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metabo?
      ( dev-python/rdkit[python_targets_python3_11
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metabo?
      ( dev-python/epam-indigo[python_targets_python3_11
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dev-python/pysftp[python_targets_python3_11
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dev-python/typing-extensions[python_targets_python3_11
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>=dev-python/tornado-3.6.6[python_targets_python3_11
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>=dev-python/cryptography-41.0.4[python_targets_python3_11
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>=dev-python/certifi-2023.7.22[python_targets_python3_11
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<dev-python/cffi-2.0.0[python_targets_python3_11
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python_targets_python3_11?
      ( dev-lang/python:3.11 )

python_targets_python3_12?
      ( dev-lang/python:3.12 )

python_targets_python3_13?
      ( dev-lang/python:3.13 )

python_targets_python3_14?
      ( dev-lang/python:3.14 )