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dev-python/coolpuppy

A versatile tool to perform pile-up analysis on Hi-C data in .cool format.

Screenshots

  • coolpuppy-1.1.0
    ~amd64 ~x86
    python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 python_targets_python3_14

    View      Download      Browse     License:   
    Overlay: pypi

Runtime Dependencies

coolpuppy-1.1.0





>=dev-python/h5py-3.0[python_targets_python3_11
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,python_targets_python3_13
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dev-python/cython[python_targets_python3_11
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,python_targets_python3_14
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dev-python/cooler[python_targets_python3_11
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>=dev-python/numpy-1.16.5[python_targets_python3_11
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dev-python/pandas[python_targets_python3_11
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dev-python/scipy[python_targets_python3_11
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dev-python/cooltools[python_targets_python3_11
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dev-python/pyyaml[python_targets_python3_11
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dev-python/more-itertools[python_targets_python3_11
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dev-python/bioframe[python_targets_python3_11
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dev-python/matplotlib[python_targets_python3_11
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dev-python/seaborn[python_targets_python3_11
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dev-python/natsort[python_targets_python3_11
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dev-python/m2r2[python_targets_python3_11
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dev-python/h5sparse[python_targets_python3_11
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dev-python/multiprocessing-logging[python_targets_python3_11
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python_targets_python3_11?
      ( dev-lang/python:3.11 )

python_targets_python3_12?
      ( dev-lang/python:3.12 )

python_targets_python3_13?
      ( dev-lang/python:3.13 )

python_targets_python3_14?
      ( dev-lang/python:3.14 )