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Tool to submit genomics pipeline outputs to the ENCODE Portal

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  • accession-4.8.4
    ~amd64 ~x86
    dev docs tests python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 python_targets_python3_14

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    Overlay: pypi

Runtime Dependencies

accession-4.8.4





~dev-python/sqlalchemy-1.3.17[python_targets_python3_11
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dev-python/attrs[python_targets_python3_11
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~dev-python/protobuf-3.20.1[python_targets_python3_11
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~dev-python/boto3-1.17.108[python_targets_python3_11
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dev-python/caper[python_targets_python3_11
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dev-python/encode-utils[python_targets_python3_11
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~dev-python/flatdict-4.0.1[python_targets_python3_11
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~dev-python/google-api-core-1.21.0[python_targets_python3_11
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~dev-python/google-auth-1.18.0[python_targets_python3_11
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dev-python/google-cloud-storage[python_targets_python3_11
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dev-python/google-cloud-tasks[python_targets_python3_11
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dev-python/miniwdl[python_targets_python3_11
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dev-python/qc-utils[python_targets_python3_11
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~dev-python/typing-extensions-3.7.4.2[python_targets_python3_11
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dev?
      ( dev-python/sphinx[python_targets_python3_11
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dev?
      ( dev-python/pytest[python_targets_python3_11
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dev?
      ( dev-python/pytest-cov[python_targets_python3_11
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dev?
      ( ~dev-python/pytest-mock-3.6.1[python_targets_python3_11
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dev?
      ( dev-python/docker[python_targets_python3_11
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dev?
      ( dev-python/requests[python_targets_python3_11
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dev?
      ( dev-python/pre-commit[python_targets_python3_11
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dev?
      ( dev-python/sqlalchemy-stubs[python_targets_python3_11
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dev?
      ( dev-python/boto3-stubs[python_targets_python3_11
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docs?
      ( dev-python/sphinx[python_targets_python3_11
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tests?
      ( dev-python/pytest[python_targets_python3_11
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tests?
      ( dev-python/pytest-cov[python_targets_python3_11
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,python_targets_python3_12
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,python_targets_python3_13
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] )

tests?
      ( ~dev-python/pytest-mock-3.6.1[python_targets_python3_11
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tests?
      ( dev-python/docker[python_targets_python3_11
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tests?
      ( dev-python/requests[python_targets_python3_11
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python_targets_python3_11?
      ( dev-lang/python:3.11 )

python_targets_python3_12?
      ( dev-lang/python:3.12 )

python_targets_python3_13?
      ( dev-lang/python:3.13 )

python_targets_python3_14?
      ( dev-lang/python:3.14 )