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sci-chemistry/pymol

A Python-extensible molecular graphics system

Screenshots

  • pymol-9999
    web python_targets_python2_7

    View      Download      Browse     License: PSF-2.2   
    Overlay: science (layman)
  • pymol-2.3.0-r1
    ~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
    web python_targets_python2_7

    View      Download      Browse     License: PSF-2.2   
    Overlay: gentoo (distro)
  • pymol-1.8.4.0-r1
    amd64 x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
    web python_targets_python2_7

    View      Download      Browse     License: PSF-2.2   
    Overlay: gentoo (distro)

ChangeLog

commit 3072d10e6c4f21185d53e4728d0fa0fad58537e7
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Dec 10 22:20:38 2017 +0000

Update Manifests to new hashes

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit bce61aa3e4fe85fe411df858eb30ebe72a3a8f88
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Nov 18 20:39:44 2017 +0000

Consistently ident with tabs

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit f69e73182fc7cdc6c600a72fceb88ae1626db25d
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Feb 25 16:50:59 2017 +0000

Drop leftover from CVS in HEADER

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 057a98c5e6346d6696fcc7b0ec8fefc9e826245f
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:53:09 2016 +0100

metadata.xml: Set type

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit b9d823e1ea1018d1356a0c18a083eab4d5ea6d8d
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:50:12 2016 +0100

metadata.xml: convert hard -> proj

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 2ef24e800910be3786e23a31a0217ba0f38659f8
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Jan 7 15:10:39 2016 +0100

Drop ChangeLogs in favour of commit messages

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 48fda2d43d2691c28b535a2b4e289276cfaf079f
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Nov 12 17:23:32 2015 +0100

sci-chemistry/pymol: Always use included apbs plugin

Correctly block files collisions

Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=565600

Package-Manager: portage-2.2.23
Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 591f6e6824b7548d69fd32b837704785b7c03667
Author: Justin Lecher <jlec@gentoo.org>
Date: Tue Nov 10 11:52:10 2015 +0100

Update moved virtuals

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 290470a59921ff69775330acff730388f4740c6a
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Aug 27 17:01:35 2015 +0200

sci-chemistry/pymol: React on subslot changes

Package-Manager: portage-2.2.20.1
Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 6271f0c55cbb6af7fe88ae1ec9d7dbdedd562565
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Aug 17 08:53:12 2015 +0200

Convert all $Header$ to $Id$ tags as it has be done in gentoo.git

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit a891336052fb27fd9f3f82e33c30f0984f50ea54
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:25:27 2015 +0200

Revert "Gentoo does https by default now"

This reverts commit 98718494343af4990facdefb0033471686e975a6.

commit 98718494343af4990facdefb0033471686e975a6
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:14:25 2015 +0200

Gentoo does https by default now

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 5e627dd32eaaec463699b87f9218fba9b23d88d0
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Mar 16 08:15:52 2015 +0100

sci-chemistry/pymol: Move to virtual/pmw

Package-Manager: portage-2.2.18

commit b80d9ec04bf5d1fbddafa1c5b5d824f373d4d967
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Mar 14 09:15:04 2015 +0100

sci-chemistry/pymol: Fix for latest HEAD; fix SLOT operators

Package-Manager: portage-2.2.18

commit 0acc85d3a08b77620f564c32e16480ad0a7ea034
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Nov 5 08:24:18 2014 +0100

sci-chemistry/pymol: Drop obsolete patches

Package-Manager: portage-2.2.14

commit de472bbdde04ced59132ab600b63417a5f9b839c
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Oct 31 08:19:20 2014 +0100

sci-chemistry/pymol: Update patch to upstream suggestion

Package-Manager: portage-2.2.14

commit ecb0dc0854f860d87e7ebd237d3c83ef8f815444
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Oct 30 14:48:47 2014 +0100

sci-chemistry/pymol: Make it really multi py ABI ready; use internal apbs plugin

Package-Manager: portage-2.2.14

commit 320cca039aa2511c26ad9bdff80df8101ec9f263
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Oct 27 18:20:06 2014 +0100

sci-chemistry/pymol: Add missing PYTHON_USEDEP

Package-Manager: portage-2.2.14

commit ba1e3dbb2201dc350399f7cf3d061ea4dac33ee6
Author: Justin Lecher <jlec@gentoo.org>
Date: Tue Oct 21 08:46:58 2014 +0200

sci-chemistry/pymol: Patch included upstream

Package-Manager: portage-2.2.14

commit 5f7b312a1fa336fc5f4b98909502579ce5557155
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Oct 20 20:00:45 2014 +0200

sci-chemistry/pymol: Fix broken plugin listing

Package-Manager: portage-2.2.14

commit 0ea640fba1bbdfa7a73a48ee8dcbe81185f21193
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Oct 20 09:19:12 2014 +0200

sci-chemistry/pymol: Fix upstream buildsystem

Package-Manager: portage-2.2.14_rc1

commit b5e3d247a7f065327a063da6e6edcb802e0a0b84
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Oct 17 09:50:24 2014 +0200

sci-chemistry/pymol: Import tree changes

Package-Manager: portage-2.2.14_rc1

commit c607320009b4dc77f8c0f869f2bbb108baca32e5
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu May 1 14:23:27 2014 +0200

sci-chemistry/pymol: Drop unneeded dep

Package-Manager: portage-2.2.10

commit f18db439df8716d16fe63175526a015218b472b2
Author: Sébastien Fabbro <bicatali@gentoo.org>
Date: Thu Feb 27 15:01:29 2014 -0800

clean up keywords and masking

commit fc3784312a6f15820bb4e3a8c75115891dd36a83
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jan 26 10:22:05 2014 +0100

sci-chemistry/pymol: Update HOMEPAGE

Package-Manager: portage-2.2.8-r1

commit 77475f8f5e21afb24909dc136b199ac2c3a82f75
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Jan 15 08:47:28 2014 +0100

sci-chemistry/pymol: Readd argparse fix; fix icon installation

Package-Manager: portage-2.2.8

commit b176722593ec57ae62664e3a37a7d8d479a30da4
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Jan 15 08:44:23 2014 +0100

sci-chemistry/pymol: Merge tree changes

Package-Manager: portage-2.2.8

commit 589bc8d2acbbd885abc49614a5a626e84f5a7d0f
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Jul 24 08:10:55 2013 +0200

sci-chemistry/pymol: Fx stupid argparse import

Package-Manager: portage-2.2.0_alpha188

commit d08c1a3dc6a0c2e8780534781d2314bbbaf81c44
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Jun 26 09:14:10 2013 +0200

sci-chemistry/pymol: Update repo uri

Package-Manager: portage-2.2.0_alpha184
Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 7819594647c4260b49fae9c779dfb05ca6ae162c
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Jun 26 09:14:10 2013 +0200

sci-chemistry/pymol: Update repo uri

Package-Manager: portage-2.2.0_alpha184
Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 61e0c3c7f9266ad55e969fa6aac83f4c2ad1a823
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Mar 25 08:56:54 2013 +0100

sci-chemistry/pymol: Sync with tree

Package-Manager: portage-2.2.0_alpha169

commit 7edc182c2bb9fdd431d461c1f9e78f1ca7be1175
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Mar 3 18:33:00 2013 +0100

sci-chemistry/pymol: Fix missing DOCTYPE

Package-Manager: portage-2.2.0_alpha164

commit e330d790ad278e88972ddadfe1c4875fb12cf7fa
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Feb 18 21:26:40 2013 +0100

sci-chemistry/pymol: Fix sed syntax

Package-Manager: portage-2.2.0_alpha163

commit 6b38186682ba69818cb5803b33a8c0bf72f2c030
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Feb 18 21:24:18 2013 +0100

sci-chemistry/pymol: Fix sed syntax

Package-Manager: portage-2.2.0_alpha163

commit e4f5b3533db0f3b40cbcfeee0adbcc8684c37972
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Feb 18 21:22:05 2013 +0100

sci-chemistry/pymol: Adapt to current HEAD

Package-Manager: portage-2.2.0_alpha163

commit 37524e665700b37970924243853f1bef9bb7c6ba
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Feb 15 16:53:06 2013 +0100

sci-chemistry/pymol: adopt to current HEAD

Package-Manager: portage-2.2.0_alpha163

commit de7706fa8dab9c1d4868d1a4202d5f9188e6cad3
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Feb 4 18:19:16 2013 +0100

Next couple of fixes

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit b61bef4418f124efdf37752805951f79b6572a7a
Author: Justin Lecher <jlec@gentoo.org>
Date: Tue Jan 29 16:14:36 2013 +0100

sci-chemistry/pymol: Bump python eclass

Package-Manager: portage-2.2.0_alpha161

commit cfc42c90d0b31e8607bf554d199376ca8ac191e7
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Oct 15 19:27:01 2012 +0200

sci-chemistry/pymol: Add mime type definition

Package-Manager: portage-2.2.0_alpha138

commit 87f21976ab5bfc4a8dca73aec83cee825bbb6cc3
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Aug 12 19:56:15 2012 +0200

sci-chemistry/pymol: Correct Desktop entry

(Portage version: 2.2.0_alpha121/git/Linux x86_64, unsigned Manifest commit)

commit 343709f993aaf8c97385c4b33c5984c56991cba9
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed May 2 20:06:12 2012 +0200

sci-chemistry/pymol: Fix for latest HEAD

(Portage version: 2.2.0_alpha101/git/Linux x86_64, unsigned Manifest commit)

commit ded2958e021860bfd8e935935bc2434c2afdc684
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Mar 29 12:42:20 2012 +0200

correct URI for icons

commit ddeb680212e470d0c6e927aeb5c96b3e9689cb46
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Mar 29 12:42:20 2012 +0200

Add new icon files provided by Ramiro Téllez Sanz

(Portage version: 2.2.0_alpha96/git/Linux x86_64, unsigned Manifest commit)

commit ed1028a1b6c2a45f42d1275023094d3195bd1ad9
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Mar 29 11:07:09 2012 +0200

Import tree changes

(Portage version: 2.2.0_alpha96/git/Linux x86_64, unsigned Manifest commit)

commit f3664b2d435663982051cbb873d1a573f4421f78
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Mar 4 09:38:49 2012 +0100

Block pypy usage

(Portage version: 2.2.0_alpha89/git/Linux x86_64, unsigned Manifest commit)

commit 729c8534f774efc7b0124e16ab8766096093498c
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Feb 19 14:18:34 2012 +0100

Fix for current HEAD, correct desktop entry generation

(Portage version: 2.2.0_alpha87/git/Linux x86_64, unsigned Manifest commit)

commit b505aeb44d5b3ba28dfb7d949368452d8855ad33
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Feb 13 23:17:17 2012 +0100

Update to latest head

(Portage version: 2.2.0_alpha86/git/Linux x86_64, unsigned Manifest commit)

commit ac7b80809d0be79d8e0d08354fd707b8566036a2
Author: Andreas K. Huettel (dilfridge) <mail@akhuettel.de>
Date: Sat Jan 14 15:20:31 2012 +0100

Convert to thin manifests (as suggested by alexxy and jlec)

commit 812ffb36524400002afd40fc6c2f12b4822ec8e9
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Dec 5 17:58:47 2011 +0100

Fix pymol-9999-setup.py.patch for current HEAD

(Portage version: 2.2.0_alpha79/git/Linux x86_64, signed Manifest commit with key 70EB7916)

commit 8b78270e241be7c137bc274fc0ed20918dd616b1
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Aug 29 17:09:01 2011 +0200

Latest changes on HEAD

(Portage version: 2.2.0_alpha51/git/Linux x86_64, signed Manifest commit with key 70EB7916)

commit 7b50469d9a21a586cfb76f7b4fc21937379bc1b0
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Aug 18 12:10:06 2011 +0200

Fixed patches

(Portage version: 2.2.0_alpha51/git/Linux x86_64, signed Manifest commit with key 70EB7916)

commit d5fe6f9794ab6175d9b31e6f98af156ca81a42f4
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Jul 22 09:19:08 2011 +0200

Grap some fedora stuff, fix shadrers patch for current head

(Portage version: 2.2.0_alpha46/git/Linux x86_64, signed Manifest commit with key 70EB7916)

commit 5f93421d23e9244ea8edbe22c1d888af4c7428e2
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Jun 24 15:06:10 2011 +0200

Sort inherit and/or USE

(Portage version: 2.2.0_alpha41/git/Linux x86_64, signed Manifest commit with key 70EB7916)

commit b39098ce755dff73d9a6427441bc56aed6847e66
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Jun 2 10:44:51 2011 +0200

Fix collision with dev-python/webpy, #368947

(Portage version: 2.2.0_alpha37/git/Linux x86_64, signed Manifest commit with key 70EB7916)

commit 756d482a75f4c7d7b22f8d83d0fbf3ee42f8f6ef
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Apr 28 09:58:28 2011 +0200

Fixed patches for current HEAD

(Portage version: 2.2.0_alpha30/git/Linux x86_64, signed Manifest commit with key 70EB7916)

commit 2eb8440151cd748e70738aa6e5d53b96f68cea3a
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Apr 4 13:13:31 2011 +0200

Useless blank line on line: 13

(Portage version: 2.2.0_alpha29/git/Linux x86_64, signed Manifest commit with key 70EB7916)

commit 5bfc2f1fa057d2311f57dc3528fd45e2b177e49c
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Apr 4 13:13:06 2011 +0200

Fix to latest head

(Portage version: 2.2.0_alpha29/git/Linux x86_64, signed Manifest commit with key 70EB7916)

commit 31037cf1b9c5049882f71464ab3a6b760aa6b76c
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Nov 12 09:02:58 2010 +0100

Synchonized with tree ebuild

(Portage version: 2.1.9.24/git/Linux x86_64, signed Manifest commit with key 70EB7916)

commit e51b62b3871dc2d96bb1c8c91142e432ac4d8007
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Sep 19 12:15:48 2010 +0200

virtual/glut -> media-libs/freeglut & virtual/glu -> virtual/opengl Correction

(Portage version: 2.2_rc84/git/Linux x86_64, signed Manifest commit)

commit d4b5e409abcd3f6da35235a9c3b2ede37c5be1f2
Author: Justin Lecher <jlec@gentoo.org>
Date: Tue Jun 29 17:25:05 2010 +0200

Clean ancient version
(Portage version: 2.2_rc67/git/Linux x86_64)
(Signed Manifest commit)

commit d492143faccd4a4929912d135849e1dbe86719d9
Author: Justin Lecher <jlec@gentoo.org>
Date: Tue Jun 29 17:08:23 2010 +0200

Fix for Python ABIs
(Portage version: 2.2_rc67/git/Linux x86_64)
(Signed Manifest commit)

commit 8bc936db71b147be98b3d7a41dae7f84124bf6a8
Author: Justin Lecher <jlec@gentoo.org>
Date: Tue Jun 22 11:06:25 2010 +0200

Imported changes from tree
(Portage version: 2.2_rc67/git/Linux x86_64)
(Signed Manifest commit)

commit a49fae57b61d8114fbca3d82281d90da587bc881
Author: Justin Lecher <jlec@gentoo.org>
Date: Tue Jun 22 08:58:48 2010 +0200

Fixed my mail in metadata.xml
(Portage version: 2.2_rc67/git/Linux x86_64)
(Signed Manifest commit)

commit 150623cd42f3083c452685586687310e864408f2
Author: Justin Lecher <jlec@gentoo.org>
Date: Tue May 11 16:59:42 2010 +0200

HEAD fixes
(Portage version: 2.2_rc67/git/Linux x86_64)
(Signed Manifest commit)

commit c67824215c8ddb99e206d0145349f9568f3c95d4
Author: Justin Lecher <jlec@gentoo.org>
Date: Tue Mar 30 14:23:35 2010 +0200

Importet tree changes
(Portage version: 2.2_rc67/git/Linux x86_64)
(Signed Manifest commit)

commit 97c64a4c6060b0e228c74d9358f66be78cfef0a8
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Mon Feb 1 22:52:55 2010 +0100

apbs plugin support now depends on sci-chemistry/pymol-apbs-plugin
(Portage version: 2.2_rc62/git/Linux x86_64)
(Signed Manifest commit)

commit 73941aa588e24d04f0167e07c812e4907d800a65
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Sat Jan 2 18:29:13 2010 +0100

sci-chemistry/pymol-1.2.2 is in the tree
(Portage version: 2.2_rc61/git/Linux x86_64)
(Signed Manifest commit)

commit bb3b951c582b623ec2c8dbf70a95934017ff0708
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Fri Jan 1 11:35:29 2010 +0100

sci-chemistry/pymol -- QA work
(Portage version: 2.2_rc61/git/Linux x86_64)
(Signed Manifest commit)

commit 1287d222edd340a45aa007a411aa44a225df699f
Author: je_fro <je_fro@gentoo.org>
Date: Sat Oct 3 01:17:20 2009 -0500

Manifest

commit 2b1b97b2e7f4d9c767dcf52a6a6b32898afb6d32
Author: je_fro <je_fro@gentoo.org>
Date: Sat Oct 3 01:15:45 2009 -0500

Fixing shaders patch

commit 554e153855749c6bdbc84c31239553af63f301c8
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Fri Oct 2 17:49:57 2009 +0200

pymol bump to 1.2.2

commit 2c9669edfecf6c434a367dea96f4140da4e61389
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Mon Aug 24 10:01:34 2009 +0200

fix for bug 282503

commit f09b7c982ef8832d72c332157251a4f59970c6a4
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Mon Aug 3 08:43:31 2009 +0200

pymol-1.2.1 is in tree, lets remove it from Manifest

commit 75d244da01ba7067037d51dbc89e288e9fd87c0c
Author: je_fro <je_fro@gentoo.org>
Date: Mon Aug 3 00:31:28 2009 -0500

Added to portage tree.

commit cff15764c472b0f80b6c645387241cbdf037b088
Author: je_fro <je_fro@gentoo.org>
Date: Sun Aug 2 11:22:01 2009 -0500

removed keywords

commit 42dd7f847418d94d81ef780d9cc485cc1ba9841a
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Fri Jul 31 12:23:09 2009 +0200

pymol cleanup to move to the tree as requested by fauli in bug 269119

commit f1426e61f2474f6ea7436dbb0a8a7b32803c38fa
Author: je_fro <je_fro@gentoo.org>
Date: Fri Jul 17 00:12:38 2009 -0500

Fix up patch to apply to rc1

commit 99d142186337c4b28b2ef2a3f6b869af538af1c8
Author: je_fro <je_fro@gentoo.org>
Date: Fri Jul 17 00:10:59 2009 -0500

Modified patch

commit 7ef5af0c310a3572d0b95a90eb0b02306124da26
Author: je_fro <je_fro@gentoo.org>
Date: Fri Jul 17 00:04:30 2009 -0500

anifest

commit c89843e1586fd6bf00fd20505db6f0508cd17071
Author: je_fro <je_fro@gentoo.org>
Date: Fri Jul 17 00:03:24 2009 -0500

add a copy of pymol-1.2_rc1-shaders.patch too...

commit b5252aef9deb565c7c11e0a959e33de97a77e06f
Author: je_fro <je_fro@gentoo.org>
Date: Fri Jul 17 00:01:15 2009 -0500

Changelog

commit 482da4be367b26673ced4127e2ff0ae72152c3df
Author: je_fro <je_fro@gentoo.org>
Date: Thu Jul 16 23:58:52 2009 -0500

fix Manifest

commit 534b79eb0b590997b7819c01e6ae56e2a3f16c03
Author: je_fro <je_fro@gentoo.org>
Date: Thu Jul 16 23:56:15 2009 -0500

copy pymol-1.2_rc0-data-path.patch pymol-1.2_rc1-data-path.patch

commit a856ff00cccfb70375a9ff364ff6a9b29a05ecc3
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Tue Jul 14 13:22:21 2009 +0200

live ebuilds are live ebuilds and do not have reviesions

commit 6113a160a37dc1dd8c8569ff3ab16dee8bd8ce9a
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Fri Jul 10 10:10:00 2009 +0200

pymol -- media-video/mpeg-tools dep added

commit 8dd5440e1c41d9aabd7d444fa3216ce8cda84c58
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Thu Jul 9 22:27:52 2009 +0200

pymol -- vmd and numpy support added

commit 43269daecdc37c32cd7ba6242525eb691b9f5477
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Thu Jul 9 10:54:48 2009 +0200

pymol bump to secaond release candidate for 1.2

commit 7023475cfc4d2db9bac40f2576769ff97eaba69b
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Wed Jul 8 08:01:00 2009 +0200

pymol has two buildsstems. We use the distutils one.

commit a4c1c668faddaef796c8f0a0ebdfd930e743deaf
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Tue Jun 30 14:47:21 2009 +0200

pymol 1.2 rc0

commit 45359789867861d22e8e9a3a053e84abb331a97e
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Tue Jun 30 14:42:07 2009 +0200

pymol nosplash fix for Je_fro

commit fc69f75bf722bf703af4933060ef1c58e1386d79
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Mon Jun 29 11:10:21 2009 +0200

pymol src_unpack fix (thanks to Rene Meier)

commit 49411dc5d8a7edb7642428709e46d245d566de92
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Thu Jun 25 18:51:19 2009 +0200

another pymol splash fix

commit c6d90fbb38c266a10454a7d06b0bcaab4151598e
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Thu Jun 25 10:35:11 2009 +0200

refmac version bump
hosting of apbs patch

commit c7033368f5f42e06b2dae008604fc1745c24eee6
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Thu Jun 18 20:14:15 2009 +0200

simplify apbs patch for pamol -- Donnie told to go the most easy way for the maintainer

commit 41801200eb3e141ad6de2e64db21702706fc292c
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Mon Jun 15 09:37:23 2009 +0200

pymol bump to beta7

commit fbcd0b1a3f39600aac3419673087492dae12f800
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Wed Jun 10 15:05:48 2009 +0200

pymol rekeyworded

commit e0e5ceaa5e7fa4f394c83ce4ab6ef8f8412ffa1c
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Mon Jun 8 10:49:55 2009 +0200

pymol live ebuild added

commit b828e2355d2193f606b2f84ecb40aee68998f5ba
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Thu Apr 16 18:14:15 2009 +0200

another qa for pymol Thanks bicatali

commit a8dba0c680132a56e80928c00600806b8597d61d
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Thu Apr 16 17:53:28 2009 +0200

QA on pymol

commit 179ef88555f84d39ee390c8dedb2f64f36debf24
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Sun Apr 12 11:58:11 2009 +0200

pymol version bump to beta 6

commit f4a494223c8d7b2c82286ff7ff36aa0a27e37c68
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Tue Mar 31 12:55:19 2009 +0200

pymol version cleanup and patch fix

commit 9ea6637e7ede770c533c6feaf61b2a891d550e46
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Wed Mar 18 17:06:07 2009 +0100

sci-chemistry/pymol APBS_PSIZE fix

commit 874ba8e1de30beb110d377751ea8c2345c55e79d
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Mon Mar 9 09:37:32 2009 +0100

sci-chemistry/pymol version bump to 1.2b5
(Portage version: 2.2_rc23/git/Linux x86_64)
(Unsigned Manifest commit)

commit 0c07eb1d55c782fcddb9ceef8a9fd7985807d00a
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Tue Feb 24 09:32:14 2009 +0100

manifest fixed

commit 6a13e772eb34223057a13f22b1fcb23570dbe9fb
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Mon Feb 23 09:38:16 2009 +0100

sci-chemistry/pymol version bump to 1.2beta4

commit cc2cb4cd6105e7b2607636900b6771ae59495fb2
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Mon Feb 23 13:08:34 2009 +0100

fixed revision for pymol-1.2_beta3

commit 752adfdda864d49eb9e6d1ca3885e20f438d1282
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Fri Feb 20 16:03:15 2009 +0100

Manifest fixing

commit 5e8ea153fdb353bf081864d11783b1815d4da6fa
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Fri Feb 20 10:15:44 2009 +0100

sci-chemistry/pymol bumped to 1.2 beta 3

commit 8a40732473de580f15fdc11f5c13f42cd640a618
Author: Justin Lecher (jlec) <jlec@j-schmitz.net>
Date: Fri Feb 6 09:43:10 2009 +0100

sci-chemistry/pymol-1.2_beta added. I will maintain all beta versions in sci overlay.

commit 5bc7c9b65496777830343c0f62c9f832534ef9aa
Author: je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb>
Date: Sun Aug 17 03:46:47 2008 +0000

Moved to portage

git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@1232 32389bae-6d03-0410-99cf-db05cde120eb

commit 7683db8be66072272aa7f62dd04e0f139670c50f
Author: je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb>
Date: Sun Jul 6 21:01:44 2008 +0000

manifest

git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@1186 32389bae-6d03-0410-99cf-db05cde120eb

commit 830545711db9857ba914e83d2b08f8b8ac4e96da
Author: je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb>
Date: Sun Jul 6 18:12:17 2008 +0000

compressing the patch

git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@1185 32389bae-6d03-0410-99cf-db05cde120eb

commit 1e308e619f99fdce7f6ea69691239102842abc8d
Author: je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb>
Date: Sun Jul 6 03:07:36 2008 +0000

patches

git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@1179 32389bae-6d03-0410-99cf-db05cde120eb

commit 24b83c0872f2a018e1531223013066549e2d5ffb
Author: je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb>
Date: Sun Jul 6 02:59:30 2008 +0000

Import for testing

git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@1178 32389bae-6d03-0410-99cf-db05cde120eb

commit 9e8761de16a53f6a3e1ed973333f0fd2b7e65ab2
Author: je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb>
Date: Thu Jun 7 16:25:52 2007 +0000

Removed pymol as it's now in the main tree.


git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@648 32389bae-6d03-0410-99cf-db05cde120eb

commit 195d419b171176f2fbe20732412a1b2ed28d97d0
Author: je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb>
Date: Tue Jun 5 22:22:28 2007 +0000

Testing pymol-0.99_rc10.


git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@647 32389bae-6d03-0410-99cf-db05cde120eb

commit 8a8f5ebac2ed962a4de1f611a891b6867a9438f2
Author: je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb>
Date: Wed May 2 17:00:33 2007 +0000

Getting rid of pymol since it's in the tree now...


git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@589 32389bae-6d03-0410-99cf-db05cde120eb

commit 9a84554018338354b4adbec3fea69f67c099127f
Author: je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb>
Date: Sun Apr 29 00:33:11 2007 +0000

Add changelog thanking hodak at ncsu.


git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@581 32389bae-6d03-0410-99cf-db05cde120eb

commit a00e25794aea29918536cb5e73e93acfcc07554f
Author: je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb>
Date: Sun Apr 29 00:25:04 2007 +0000

Importing pymol-0.99_rc8.


git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@580 32389bae-6d03-0410-99cf-db05cde120eb