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sci-biology/subread

NGS suite for analysis of mapped reads, summary of exon/intron/gene counts

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ChangeLog

commit b0354031c42e401506e5c480838c528586eabd71
Author: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
Date: Tue Jan 25 11:31:08 2022 +0100

sci-biology/subread: bump to 2.0.3

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>

commit c2bedc8fe20d87568f4a7503474e355006693c1e
Author: Jakov Smolic <jakov.smolic@sartura.hr>
Date: Sat Feb 20 22:08:45 2021 +0100

sci-biology/subread: Fix build with gcc-10

Closes: https://bugs.gentoo.org/755539
Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr>

commit 333ecd2b5e8b4e4c92634af94ac075e59299dd53
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Mon Jan 18 16:16:35 2021 +0100

sci-biology/subread: version bump 2.0.1, fix fetch

Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>

commit a04795846141641b7608b245d7ae06d33d721985
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Tue Dec 29 15:15:11 2020 +0100

*/* misc fixes to make repoman happier

- http to https where possible
- remove some blank lines
- quote unqouted variables
- fdo-mime to xdg-utils
- clean up profiles/
- clean up licenses

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Closes: https://github.com/gentoo/sci/pull/999
Signed-off-by: Aisha Tammy <gentoo@aisha.cc>

commit 3072d10e6c4f21185d53e4728d0fa0fad58537e7
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Dec 10 22:20:38 2017 +0000

Update Manifests to new hashes

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit bce61aa3e4fe85fe411df858eb30ebe72a3a8f88
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Nov 18 20:39:44 2017 +0000

Consistently ident with tabs

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 3199ec7737e923dc19479e5de7b31bb583071931
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Apr 30 11:12:48 2017 +0100

Cleanup remote IDs

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit f69e73182fc7cdc6c600a72fceb88ae1626db25d
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Feb 25 16:50:59 2017 +0000

Drop leftover from CVS in HEADER

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 01a5062038a8bc55319bb81222c9f1bcd369cb20
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Feb 3 16:27:18 2017 +0000

Shorten all DESCRIPTION to <80 chars

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 057a98c5e6346d6696fcc7b0ec8fefc9e826245f
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:53:09 2016 +0100

metadata.xml: Set type

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit b9d823e1ea1018d1356a0c18a083eab4d5ea6d8d
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:50:12 2016 +0100

metadata.xml: convert hard -> proj

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 26e6def0b3eb2ebcf04bf0d1a43f84db0a5b1240
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:49:16 2016 +0100

matadata.xml: Pre Cleanup

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 2ef24e800910be3786e23a31a0217ba0f38659f8
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Jan 7 15:10:39 2016 +0100

Drop ChangeLogs in favour of commit messages

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 1037f2c1ee00dc5b87dd7979f1fbe093885236eb
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Oct 16 15:38:31 2015 +0200

Update remote-ids

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 6271f0c55cbb6af7fe88ae1ec9d7dbdedd562565
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Aug 17 08:53:12 2015 +0200

Convert all $Header$ to $Id$ tags as it has be done in gentoo.git

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit a891336052fb27fd9f3f82e33c30f0984f50ea54
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:25:27 2015 +0200

Revert "Gentoo does https by default now"

This reverts commit 98718494343af4990facdefb0033471686e975a6.

commit 98718494343af4990facdefb0033471686e975a6
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:14:25 2015 +0200

Gentoo does https by default now

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit ec7395c49abf0179b2f69f10c703fc0f7cb27303
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Thu Jan 29 23:04:25 2015 +0100

also install GTF files; added zlib dependency

Package-Manager: portage-2.2.15

commit 7211dfa04b9f68a765a5a48c254b3ee380bcdcef
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Thu Jan 29 20:11:17 2015 +0100

sci-biology/subread: new package

Package-Manager: portage-2.2.15