commit 66dbcc32b0a92ce8f6a2ccae822e73b2b9ed8810
Author: Martin Mokrejs <mmokrejs@gmail.com>
Date: Tue Mar 16 17:46:36 2021 +0100

sci-biology/stringtie: fix checksum in manifest

Package-Manager: Portage-3.0.17, Repoman-3.0.2
Signed-off-by: Martin Mokrejs <mmokrejs@gmail.com>

commit d5262133d2c941fbbf3995e7512d6d98df6fb250
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Sat Mar 6 15:55:12 2021 +0100

sci-biology/stringtie: cleanup old

Package-Manager: Portage-3.0.16, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>

commit da853fc6e6037207166108a7e7b76c74cda34360
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Sat Mar 6 15:54:52 2021 +0100

sci-biology/stringtie: EAPI bump, version bump

Package-Manager: Portage-3.0.16, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>

commit 25c5b41b494d8cd66bf5c552b35b78acc484f07e
Author: Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
Date: Wed Jun 27 14:36:48 2018 +0200

sci-biology/stringtie: version bump, accepted new upstream patch, works

CXX/CXXFLAGS are still not respected for bundled samtools subdirectory.

https://github.com/gpertea/stringtie/issues/185#issuecomment-400637035

Package-Manager: Portage-2.3.40, Repoman-2.3.9

commit 52f6543d76a8f92aa522c384dac27dc2bd213994
Author: Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
Date: Tue Jun 26 10:30:42 2018 +0200

sci-biology/stringtie: drop KEYWORDS as it does not compile

Package-Manager: Portage-2.3.40, Repoman-2.3.9

commit 989059eec92c6fda0890e076cb9fc70fc994ed3f
Author: Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
Date: Tue Jun 26 10:15:28 2018 +0200

sci-biology/stringtie: keep modified bundled copy of samtools-0.1.18

https://github.com/gpertea/stringtie/issues/185#issuecomment-400128090
https://github.com/gpertea/stringtie/issues/186#issuecomment-400131844

Therefore, keep local copy of gclib and samtools.

Still it does not compile for me with gcc-7.3.0

Package-Manager: Portage-2.3.40, Repoman-2.3.9

commit 3208b43922f41181f1109b3bf33d922eb16cc9fd
Author: Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
Date: Tue Jun 26 00:51:11 2018 +0200

sci-biology/stringtie: patch cleanup

Package-Manager: Portage-2.3.40, Repoman-2.3.9

commit b28a9f9525962c8e86f6773132e15222e7f0980c
Author: Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
Date: Tue Jun 26 00:19:50 2018 +0200

sci-biology/stringtie: document bundled sci-biology/gclib copy

Package-Manager: Portage-2.3.40, Repoman-2.3.9

commit ea5a2c0348666f4e6ff00c25a5597d4e5c0fd084
Author: Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
Date: Mon Jun 25 23:33:33 2018 +0200

sci-biology/stringtie: drop bundled samtools-0.18.1, fix Makefile

Also use properly named CXX and CXXFLAGS variables, respect their initial
values.

Package-Manager: Portage-2.3.40, Repoman-2.3.9

commit 3072d10e6c4f21185d53e4728d0fa0fad58537e7
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Dec 10 22:20:38 2017 +0000

Update Manifests to new hashes

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit bce61aa3e4fe85fe411df858eb30ebe72a3a8f88
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Nov 18 20:39:44 2017 +0000

Consistently ident with tabs

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 61094665a0622c77dea66a04ec74b5e4fd71bb46
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Apr 29 10:50:07 2017 +0100

Update remote ids

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit f69e73182fc7cdc6c600a72fceb88ae1626db25d
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Feb 25 16:50:59 2017 +0000

Drop leftover from CVS in HEADER

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit e035d84de52892630a985838e23f7afcfd8b386a
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Sun Apr 24 16:08:40 2016 +0200

sci-biology/stringtie: shorten DESCRIPTION line

Package-Manager: portage-2.2.28

commit 64dcae2a7b0f8bdbf5a737b2a440c95376e99ba6
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Sun Apr 24 15:50:09 2016 +0200

sci-biology/stringtie: new package

Package-Manager: portage-2.2.28