dev-python/ngs-toolkit
A toolkit for NGS analysis with Python.
Runtime Dependencies
ngs-toolkit-0.25.1
>=dev-python/setuptools-scm-3.3.3[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/numpy-1.15.0[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/scipy-1.0.0[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
dev-python/fastcluster[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/pandas-0.25.0[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
dev-python/matplotlib[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/seaborn-0.10.0[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
dev-python/parmap[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
dev-python/pysam[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
dev-python/pybedtools[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/scikit-learn-0.19.1[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/statsmodels-0.8.0[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/patsy-0.4.1[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/tqdm-4.19.5[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
dev-python/peppy[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
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?
]
dev-python/divvy[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
dev-python/attmap[python_targets_python3_11
(-)
?
,python_targets_python3_12
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?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
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?
]
>=dev-python/requests-2.21.0[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/jinja2-2.10.1[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/natsort-6.0.0[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
>=dev-python/joblib-0.12.5[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
]
docs?
( dev-python/sphinx[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
docs?
( dev-python/sphinx-rtd-theme[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
docs?
( dev-python/sphinx-issues[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
docs?
( dev-python/sphinx-argparse[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/scanpy[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/scanorama[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/phate[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/scvelo[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/loompy[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/fbpca[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/MulticoreTSNE[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/python-igraph[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/louvain[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/leidenalg[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
single_cell?
( dev-python/fa2[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
testing?
( >=dev-python/pytest-4.4.0[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
testing?
( >=dev-python/coverage-4.5.2[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
testing?
( dev-python/pytest-cov[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
testing?
( dev-python/codecov[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
testing?
( dev-python/codacy-coverage[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
testing?
( dev-python/pytest-xdist[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
testing?
( >=dev-python/rpy2-3.2.0[python_targets_python3_11
(-)
?
,python_targets_python3_12
(-)
?
,python_targets_python3_13
(-)
?
,python_targets_python3_14
(-)
?
] )
python_targets_python3_11?
( dev-lang/python:3.11 )
python_targets_python3_12?
( dev-lang/python:3.12 )
python_targets_python3_13?
( dev-lang/python:3.13 )
python_targets_python3_14?
( dev-lang/python:3.14 )


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