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Calculation of strain-level metrics

Screenshots

  • inStrain-1.10.0
    ~amd64 ~x86
    python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 python_targets_python3_14

    View      Download      Browse     License: MIT   
    Overlay: pypi

Runtime Dependencies

inStrain-1.10.0





dev-python/numpy[python_targets_python3_11
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>=dev-python/pandas-0.25[python_targets_python3_11
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dev-python/seaborn[python_targets_python3_11
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dev-python/matplotlib[python_targets_python3_11
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dev-python/biopython[python_targets_python3_11
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dev-python/tqdm[python_targets_python3_11
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dev-python/pysam[python_targets_python3_11
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dev-python/networkx[python_targets_python3_11
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dev-python/h5py[python_targets_python3_11
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dev-python/psutil[python_targets_python3_11
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dev-python/lmfit[python_targets_python3_11
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dev-python/pytest[python_targets_python3_11
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python_targets_python3_11?
      ( dev-lang/python:3.11 )

python_targets_python3_12?
      ( dev-lang/python:3.12 )

python_targets_python3_13?
      ( dev-lang/python:3.13 )

python_targets_python3_14?
      ( dev-lang/python:3.14 )