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dev-python/dnaio

dnaio processes FASTQ, FASTA and uBAM files

Screenshots

  • dnaio-1.2.1
    ~amd64
    test test python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 python_targets_python3_13

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    Overlay: science

ChangeLog

commit 421ae19c6a1e8b7c8f2d42990d9a951d1e4aa0a2
Author: Alexey Shvetsov <alexxy@gentoo.org>
Date: Sun Sep 29 16:26:44 2024 +0300

dev-python/dnaio: new package, add 1.2.1

Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>

commit d4bbcf32b2173ae49e049b27bb77031376537b34
Author: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
Date: Tue May 2 14:04:25 2023 +0200

dev-python/dnaio: treeclean

Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>

commit bd45a75cb1ba4c088b79d53981d44eeaa45f9582
Author: Aisha Tammy <gentoo@aisha.cc>
Date: Thu May 20 21:42:36 2021 +0000

dev-python/dnaio: version bump to 0.5.1

Package-Manager: Portage-3.0.18, Repoman-3.0.3
Signed-off-by: Aisha Tammy <gentoo@aisha.cc>

commit c9419e0ec2cbc178aa1df6cfe599808fec40d1c8
Author: Sam James <sam@gentoo.org>
Date: Fri Feb 12 21:40:09 2021 +0000

*/*: drop obsolete python_targets_python3_6

Hopefully got them all:
* find . | grep -i .ebuild | xargs perl -p -i -e "s/6\.\.9/7\.\.9/"
* find . | grep -i .ebuild | xargs perl -p -i -e "s/3_{6,7/3_{7/"

Signed-off-by: Sam James <sam@gentoo.org>

commit 2f73e76cad9eeff44eba8b34aad6276c280d3baa
Author: Aisha Tammy <gentoo@aisha.cc>
Date: Wed Dec 23 02:52:32 2020 +0000

dev-python/dnaio: version bump to 0.5.0

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Aisha Tammy <gentoo@aisha.cc>

commit e00b4faa41df701e9072db63491ebd080e080006
Author: Aisha Tammy <gentoo@aisha.cc>
Date: Sun Nov 8 16:25:43 2020 +0000

dev-python/dnaio: version bump to 0.4.3

Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo@aisha.cc>

commit 26a6561ed3947a5427c4d1639d9d6d3ac8c4ae9a
Author: Aisha Tammy <gentoo@aisha.cc>
Date: Sun Sep 27 22:40:12 2020 +0000

dev-python/dnaio: explain no tests

Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo@aisha.cc>

commit 151c5a991dc9f30e3462abcaf6fa6f70b4dfad44
Author: Aisha Tammy <gentoo@aisha.cc>
Date: Mon Sep 21 20:16:04 2020 -0400

dev-python/dnaio: dependency for cutadapt

fast reader for FASTA FASTQ files

Package-Manager: Portage-3.0.7, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo@aisha.cc>