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dev-python/colabfold

Making protein folding accessible to all. Predict proteins structures both in google colab and on your machine

Screenshots

  • colabfold-1.5.5
    ~amd64 ~x86
    alphafold alphafold-minus-jax python_targets_python3_11

    View      Download      Browse     License: MIT, but separate licenses for the trained weights   
    Overlay: pypi

Runtime Dependencies

colabfold-1.5.5


<dev-python/absl-py-2.0.0[python_targets_python3_11
      (-)
?
]

alphafold?
      ( dev-python/alphafold-colabfold[python_targets_python3_11
            (-)
      ?
] )

alphafold-minus-jax?
      ( dev-python/alphafold-colabfold[python_targets_python3_11
            (-)
      ?
] )


<dev-python/appdirs-2.0.0[python_targets_python3_11
      (-)
?
]

dev-python/biopython[python_targets_python3_11
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?
]

dev-python/dm-haiku[python_targets_python3_11
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?
]

<dev-python/importlib-metadata-5.0.0[python_targets_python3_11
      (-)
?
]

alphafold?
      ( dev-python/jax[python_targets_python3_11
            (-)
      ?
] )


<dev-python/matplotlib-4.0.0[python_targets_python3_11
      (-)
?
]

<dev-python/numpy-2.0.0[python_targets_python3_11
      (-)
?
]

<dev-python/pandas-2.0.0[python_targets_python3_11
      (-)
?
]

dev-python/py3Dmol[python_targets_python3_11
      (-)
?
]

<dev-python/requests-3.0.0[python_targets_python3_11
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?
]

dev-python/tensorflow-cpu[python_targets_python3_11
      (-)
?
]

dev-python/tensorflow-macos[python_targets_python3_11
      (-)
?
]

<dev-python/tqdm-5.0.0[python_targets_python3_11
      (-)
?
]

python_targets_python3_11?
      ( dev-lang/python:3.11 )