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dev-python/RNAlysis

RNAlysis is an analysis software for RNA sequencing data. RNAlysis can help to filter, visualize, explore, analyze, and share your data.

Screenshots

  • RNAlysis-4.1.2
    ~amd64 ~x86
    all cutadapt fastq hdbscan install-jdk networkx numba picardtools pyvis randomization reports single-set xlmhglite python_targets_python3_11 python_targets_python3_12 python_targets_python3_13

    View      Download      Browse     License: MIT   
    Overlay: pypi

Runtime Dependencies

RNAlysis-4.1.2




<dev-python/numpy-3.0[python_targets_python3_11
      (-)
?
,python_targets_python3_12
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?
,python_targets_python3_13
      (-)
?
]



>=dev-python/matplotlib-3.10[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/seaborn-0.13.2[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/statsmodels-0.14.0[python_targets_python3_11
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?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/scikit-learn-1.5.0[python_targets_python3_11
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?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



dev-python/grid-strategy[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/pyyaml-6.0[python_targets_python3_11
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?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



dev-python/UpSetPlot[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/matplotlib-venn-1.1.1[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/scipy-1.14.0[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



dev-python/pairwisedist[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/requests-2.32[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/graphviz-0.20.3[python_targets_python3_11
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?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/joblib-1.4.2[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/tqdm-4.67[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/appdirs-1.4.4[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/typing-extensions-4.12[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/pyqt6-6.9[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/qdarkstyle-3.0[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/defusedxml-0.7.1[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/aiohttp-3.11[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/aiodns-3.2[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



dev-python/Brotli[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



dev-python/aiolimiter[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/tenacity-9.0.0[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



dev-python/mslex[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



>=dev-python/nest-asyncio-1.6.0[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



dev-python/kmedoids[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
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?
]



dev-python/polars[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]



<dev-python/pandas-3.0[python_targets_python3_11
      (-)
?
,python_targets_python3_12
      (-)
?
,python_targets_python3_13
      (-)
?
]

all?
      ( dev-python/pyvis[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

all?
      ( dev-python/numba[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

all?
      ( >=dev-python/networkx-3.4.2[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

all?
      ( dev-python/xlmhglite[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

all?
      ( dev-python/install-jdk[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

all?
      ( dev-python/hdbscan[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

all?
      ( dev-python/cutadapt[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

cutadapt?
      ( dev-python/cutadapt[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

fastq?
      ( dev-python/cutadapt[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

hdbscan?
      ( dev-python/hdbscan[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

install-jdk?
      ( dev-python/install-jdk[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

networkx?
      ( >=dev-python/networkx-3.4.2[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

numba?
      ( dev-python/numba[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

picardtools?
      ( dev-python/install-jdk[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

pyvis?
      ( dev-python/pyvis[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

randomization?
      ( dev-python/numba[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

reports?
      ( dev-python/pyvis[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

reports?
      ( >=dev-python/networkx-3.4.2[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

single-set?
      ( dev-python/xlmhglite[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

xlmhglite?
      ( dev-python/xlmhglite[python_targets_python3_11
            (-)
      ?
,python_targets_python3_12
            (-)
      ?
,python_targets_python3_13
            (-)
      ?
] )

python_targets_python3_11?
      ( dev-lang/python:3.11 )

python_targets_python3_12?
      ( dev-lang/python:3.12 )

python_targets_python3_13?
      ( dev-lang/python:3.13 )