# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Protein & Interactomic Graph Construction for Machine Learning"

HOMEPAGE="https://github.com/a-r-j/graphein"
LICENSE="MIT"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="dev extras"
DEPENDENCIES="dev-python/pandas[${PYTHON_USEDEP}]
	dev-python/biopandas[${PYTHON_USEDEP}]
	dev-python/biopython[${PYTHON_USEDEP}]
	dev-python/bioservices[${PYTHON_USEDEP}]
	dev-python/cpdb-protein[${PYTHON_USEDEP}]
	dev-python/cython[${PYTHON_USEDEP}]
	dev-python/deepdiff[${PYTHON_USEDEP}]
	dev-python/loguru[${PYTHON_USEDEP}]
	dev-python/looseversion[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.4.3[${PYTHON_USEDEP}]
	dev-python/multipledispatch[${PYTHON_USEDEP}]
	dev-python/networkx[${PYTHON_USEDEP}]
	<dev-python/numpy-2.0[${PYTHON_USEDEP}]
	dev-python/pandas[${PYTHON_USEDEP}]
	dev-python/plotly[${PYTHON_USEDEP}]
	dev-python/pydantic[${PYTHON_USEDEP}]
	dev-python/rich[${PYTHON_USEDEP}]
	dev-python/rich-click[${PYTHON_USEDEP}]
	dev-python/seaborn[${PYTHON_USEDEP}]
	>dev-python/pyyaml-5.4.0[${PYTHON_USEDEP}]
	dev-python/scikit-learn[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.8[${PYTHON_USEDEP}]
	dev-python/tqdm[${PYTHON_USEDEP}]
	dev-python/wget[${PYTHON_USEDEP}]
	dev-python/xarray[${PYTHON_USEDEP}]
	dev-python/jaxtyping[${PYTHON_USEDEP}]
	dev? ( dev-python/black[${PYTHON_USEDEP}] )
	dev? ( dev-python/flake8[${PYTHON_USEDEP}] )
	dev? ( dev-python/hypothesis[${PYTHON_USEDEP}] )
	dev? ( dev-python/interrogate[${PYTHON_USEDEP}] )
	dev? ( dev-python/isort[${PYTHON_USEDEP}] )
	dev? ( dev-python/nbstripout[${PYTHON_USEDEP}] )
	dev? ( dev-python/nbval[${PYTHON_USEDEP}] )
	dev? ( dev-python/pandoc[${PYTHON_USEDEP}] )
	dev? ( dev-python/pre-commit[${PYTHON_USEDEP}] )
	dev? ( dev-python/pycodestyle[${PYTHON_USEDEP}] )
	dev? ( dev-python/pydocstyle[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest-xdist[${PYTHON_USEDEP}] )
	extras? ( dev-python/biovec[${PYTHON_USEDEP}] )
	extras? ( dev-python/propy3[${PYTHON_USEDEP}] )
	extras? ( dev-python/pyaaisc[${PYTHON_USEDEP}] )
	extras? ( dev-python/mpl-chord-diagram[${PYTHON_USEDEP}] )
	extras? ( dev-python/rdkit[${PYTHON_USEDEP}] )
	extras? ( dev-python/selfies[${PYTHON_USEDEP}] )
	extras? ( dev-python/smilite[${PYTHON_USEDEP}] )
	extras? ( dev-python/einops[${PYTHON_USEDEP}] )
	extras? ( dev-python/foldcomp[${PYTHON_USEDEP}] )
	extras? ( dev-python/nest-asyncio[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"