# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="An automated T cell type annotation tool for scRNA-seq datasets."

HOMEPAGE="https://github.com/GuoBioinfoLab/STCAT"
LICENSE="MIT"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES="dev-python/anndata[${PYTHON_USEDEP}]
	~dev-python/array-api-compat-1.10.0[${PYTHON_USEDEP}]
	~dev-python/click-8.1.8[${PYTHON_USEDEP}]
	~dev-python/contourpy-1.3.0[${PYTHON_USEDEP}]
	~dev-python/cycler-0.12.1[${PYTHON_USEDEP}]
	~dev-python/et-xmlfile-2.0.0[${PYTHON_USEDEP}]
	~dev-python/exceptiongroup-1.2.2[${PYTHON_USEDEP}]
	~dev-python/fonttools-4.55.3[${PYTHON_USEDEP}]
	~dev-python/h5py-3.12.1[${PYTHON_USEDEP}]
	dev-python/igraph[${PYTHON_USEDEP}]
	~dev-python/importlib-resources-6.5.2[${PYTHON_USEDEP}]
	~dev-python/joblib-1.4.2[${PYTHON_USEDEP}]
	~dev-python/kiwisolver-1.4.7[${PYTHON_USEDEP}]
	dev-python/leidenalg[${PYTHON_USEDEP}]
	dev-python/llvmlite[${PYTHON_USEDEP}]
	~dev-python/matplotlib-3.9.4[${PYTHON_USEDEP}]
	~dev-python/natsort-8.4.0[${PYTHON_USEDEP}]
	~dev-python/networkx-3.2.1[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	~dev-python/numpy-1.26.4[${PYTHON_USEDEP}]
	~dev-python/openpyxl-3.1.5[${PYTHON_USEDEP}]
	~dev-python/packaging-24.2[${PYTHON_USEDEP}]
	~dev-python/pandas-2.2.0[${PYTHON_USEDEP}]
	~dev-python/patsy-1.0.1[${PYTHON_USEDEP}]
	~dev-python/pillow-11.1.0[${PYTHON_USEDEP}]
	dev-python/pynndescent[${PYTHON_USEDEP}]
	~dev-python/pyparsing-3.2.1[${PYTHON_USEDEP}]
	~dev-python/python-dateutil-2.9.0_p0[${PYTHON_USEDEP}]
	~dev-python/pytz-2024.2[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	~dev-python/scikit-learn-1.2.2[${PYTHON_USEDEP}]
	~dev-python/scipy-1.13.1[${PYTHON_USEDEP}]
	~dev-python/seaborn-0.13.2[${PYTHON_USEDEP}]
	dev-python/session-info[${PYTHON_USEDEP}]
	~dev-python/six-1.17.0[${PYTHON_USEDEP}]
	~dev-python/statsmodels-0.14.4[${PYTHON_USEDEP}]
	dev-python/stdlib-list[${PYTHON_USEDEP}]
	~dev-python/texttable-1.7.0[${PYTHON_USEDEP}]
	~dev-python/threadpoolctl-3.5.0[${PYTHON_USEDEP}]
	~dev-python/tqdm-4.67.1[${PYTHON_USEDEP}]
	~dev-python/tzdata-2024.2[${PYTHON_USEDEP}]
	dev-python/umap-learn[${PYTHON_USEDEP}]
	~dev-python/zipp-3.21.0[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"