# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Python package for Next Generation Sequencing fragment manipulation"

HOMEPAGE="https://github.com/kylessmith/ngsfragments"
LICENSE="GPL-2+"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES=">=dev-python/numpy-1.23.5[${PYTHON_USEDEP}]
	<dev-python/cython-4.0.0[${PYTHON_USEDEP}]
	<dev-python/pandas-3.0.0[${PYTHON_USEDEP}]
	dev-python/ailist[${PYTHON_USEDEP}]
	dev-python/linear-segment[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	dev-python/intervalframe[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.7.1[${PYTHON_USEDEP}]
	dev-python/bokeh[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.9.1[${PYTHON_USEDEP}]
	>=dev-python/statsmodels-0.14.0[${PYTHON_USEDEP}]
	>=dev-python/seaborn-0.12.2[${PYTHON_USEDEP}]
	dev-python/projectframe[${PYTHON_USEDEP}]
	dev-python/hmmcnv[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-1.2.2[${PYTHON_USEDEP}]
	dev-python/genome-info[${PYTHON_USEDEP}]
	<dev-python/h5py-4.0.0[${PYTHON_USEDEP}]
	dev-python/loess[${PYTHON_USEDEP}]
	<dev-python/pyarrow-22.0.0[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"