# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Tool for applying and validating cellxgene integration schema to single cell datasets"

HOMEPAGE="https://github.com/chanzuckerberg/single-cell-curation"
LICENSE="MIT"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME//-/_}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME//-/_}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES="dev-python/anndata[${PYTHON_USEDEP}]
	dev-python/cellxgene-ontology-guide[${PYTHON_USEDEP}]
	<dev-python/click-9.0[${PYTHON_USEDEP}]
	<dev-python/cython-4.0[${PYTHON_USEDEP}]
	dev-python/dask[${PYTHON_USEDEP}]
	dev-python/duckdb[${PYTHON_USEDEP}]
	dev-python/ibis-framework[${PYTHON_USEDEP}]
	<dev-python/numpy-3.0[${PYTHON_USEDEP}]
	<dev-python/pandas-3.0[${PYTHON_USEDEP}]
	>=dev-python/pyarrow-19.0[${PYTHON_USEDEP}]
	<dev-python/pyyaml-7.0[${PYTHON_USEDEP}]
	<dev-python/scipy-1.16[${PYTHON_USEDEP}]
	dev-python/sparse[${PYTHON_USEDEP}]
	<dev-python/semver-4.0[${PYTHON_USEDEP}]
	<dev-python/xxhash-4.0[${PYTHON_USEDEP}]
	<dev-python/matplotlib-4.0[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"