# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Transfer learning with Architecture Surgery on Single-cell data"

HOMEPAGE="https://github.com/theislab/scarches"
LICENSE="MIT"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES="dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/anndata[${PYTHON_USEDEP}]
	dev-python/scHPL[${PYTHON_USEDEP}]
	>=dev-python/h5py-2.10.0[${PYTHON_USEDEP}]
	dev-python/torch[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.19.2[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.5.2[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-0.23.2[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.3.1[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.1.2[${PYTHON_USEDEP}]
	dev-python/scvi-tools[${PYTHON_USEDEP}]
	>=dev-python/tqdm-4.56.0[${PYTHON_USEDEP}]
	dev-python/requests[${PYTHON_USEDEP}]
	dev-python/gdown[${PYTHON_USEDEP}]
	dev-python/leidenalg[${PYTHON_USEDEP}]
	dev-python/muon[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"