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sci-chemistry/coot

Crystallographic Object-Oriented Toolkit

Screenshots

  • coot-9999
    +openmp static-libs test python_targets_python2_7

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    Overlay: science (layman)
  • coot-0.8.2-r1
    ~amd64 ~x86 ~amd64-linux ~x86-linux
    +openmp static-libs test python_targets_python2_7

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    Overlay: gentoo (layman)

ChangeLog

# ChangeLog for sci-chemistry/coot
# Copyright 1999-2016 Gentoo Foundation; Distributed under the GPL v2
# (auto-generated from git log)

*coot-0.7.2 (09 Aug 2015)
*coot-0.7.1-r1 (09 Aug 2015)
*coot-0.7 (09 Aug 2015)

09 Aug 2015; Robin H. Johnson <robbat2@gentoo.org> +coot-0.7.ebuild,
+coot-0.7.1-r1.ebuild, +coot-0.7.2.ebuild,
+files/0.6.2-clipper-config.patch, +files/0.6.2-gl.patch,
+files/0.6.2-libpng15.patch, +files/0.6.2-mmdb-config.patch,
+files/0.6.2-ssm.patch, +files/0.6.2-test.patch,
+files/coot-0.7-clipper-config.patch, +files/coot-0.7-goocanvas.patch,
+files/coot-0.7-mmdb-config.patch, +files/coot-0.7-ssm.patch, +metadata.xml:
proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration
tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this
project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo
developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve
cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014
work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on
the bikeshed

24 Aug 2015; Justin Lecher <jlec@gentoo.org> coot-0.7.ebuild,
coot-0.7.1-r1.ebuild, coot-0.7.2.ebuild, metadata.xml:
Use https by default

Convert all URLs for sites supporting encrypted connections from http to
https

Signed-off-by: Justin Lecher <jlec@gentoo.org>

24 Aug 2015; Mike Gilbert <floppym@gentoo.org> metadata.xml:
Revert DOCTYPE SYSTEM https changes in metadata.xml

repoman does not yet accept the https version.
This partially reverts eaaface92ee81f30a6ac66fe7acbcc42c00dc450.

Bug: https://bugs.gentoo.org/552720

*coot-0.8.2 (15 Sep 2015)

15 Sep 2015; Justin Lecher <jlec@gentoo.org> +coot-0.8.2.ebuild,
+files/coot-0.8.2-desktop.patch, +files/coot-0.8.2-libguile.patch,
+files/coot-0.8.2-libtool.patch, +files/coot-0.8.2-sandbox-icons.patch:
Version Bump

Package-Manager: portage-2.2.20.1
Signed-off-by: Justin Lecher <jlec@gentoo.org>

20 Sep 2015; Agostino Sarubbo <ago@gentoo.org> coot-0.7.2.ebuild:
x86 stable wrt bug #529518

Package-Manager: portage-2.2.20.1
RepoMan-Options: --include-arches="x86"

25 Sep 2015; Justin Lecher <jlec@gentoo.org> coot-0.8.2.ebuild:
Add KEYWORDS back

Package-Manager: portage-2.2.21
Signed-off-by: Justin Lecher <jlec@gentoo.org>

*coot-0.8.2-r1 (25 Sep 2015)

25 Sep 2015; Justin Lecher <jlec@gentoo.org> -coot-0.8.2.ebuild,
+coot-0.8.2-r1.ebuild:
Don't set LD_LIBRARY_PATH

Package-Manager: portage-2.2.21
Signed-off-by: Justin Lecher <jlec@gentoo.org>

10 Oct 2015; Mike Frysinger <vapier@gentoo.org> coot-0.8.2-r1.ebuild:
fix various encoding corruption

26 Oct 2015; Justin Lecher <jlec@gentoo.org> -coot-0.7.ebuild,
-coot-0.7.1-r1.ebuild, -coot-0.7.2.ebuild:
Drop "CCP4: Software for Macromolecular Crystallography"

obsoletes:
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=160190
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=324059
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=332485
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=367771
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=367773
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=383227
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=448756
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=460502
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=460504
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=466936
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=467040
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=467048
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=476580
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478580
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478586
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478588
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478594
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478604
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=521646
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=528512
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=530878
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=540760
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=555614
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=556498
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=557038
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=561196
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=562780

Signed-off-by: Justin Lecher <jlec@gentoo.org>

30 Nov 2015; Justin Lecher <jlec@gentoo.org> coot-0.8.2-r1.ebuild:
Cleanup unused Manifest entries

Signed-off-by: Justin Lecher <jlec@gentoo.org>

24 Jan 2016; Michał Górny <mgorny@gentoo.org> metadata.xml:
Replace all herds with appropriate projects (GLEP 67)

Replace all uses of herd with appropriate project maintainers, or no
maintainers in case of herds requested to be disbanded.

24 Jan 2016; Michał Górny <mgorny@gentoo.org> metadata.xml:
Set appropriate maintainer types in metadata.xml (GLEP 67)

14 Feb 2016; Justin Lecher <jlec@gentoo.org> coot-0.8.2-r1.ebuild:
Chop DESCRIPTION to 80 chars

Package-Manager: portage-2.2.27
Signed-off-by: Justin Lecher <jlec@gentoo.org>