gpo.zugaina.org

Search Portage & Overlays:

dev-haskell/bio

A bioinformatics library

Screenshots

  • bio-0.5.3-r2
    ~amd64 ~x86
    +examples test doc hscolour profile

    View      Download      Browse     License: LGPL-2.1   
    Overlay: gentoo (distro)
  • bio-0.5.3-r2
    ~amd64 ~x86
    +examples test doc hscolour hoogle profile

    View      Download      Browse     License: LGPL-2.1   
    Overlay: haskell (layman)

ChangeLog

commit 1c78f9f67aef7014b77477fe19817132f909ed2d
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Wed Jun 6 16:16:02 2018 +0000

dev-haskell/bio: tweak for ghc-8.4

Package-Manager: Portage-2.3.40, Repoman-2.3.9

commit 2a94f64d40e69b69ddfa1b5da7906d17009e5e6f
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Fri Nov 24 09:25:20 2017 +0000

refresh Manifests

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit 1a6ba469382ab24f8b77b4ff3b043b6e2ed68306
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Tue Feb 28 21:38:05 2017 +0000

follow ::gentoo in removing '# $Id$' headers

Done as
$ sed -i */*/*.ebuild -e '/^# \$Id\$$/d'

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit bd600fe6f30db791cb7f572786c0c9cd20c2b594
Author: Sergei Trofimovich <siarheit@google.com>
Date: Wed May 25 23:04:52 2016 +0100

dev-haskell/bio: allow transformers-0.5

Package-Manager: portage-2.3.0_rc1

commit aa19eeb10bc2eb3e09f93fa8a102c322742943e4
Author: Vikraman Choudhury <vikraman@gentoo.org>
Date: Tue Jan 26 14:19:48 2016 -0500

Update metadata.xml for GLEP 67

commit 4a585b54eb5f4c66e9b867f0bf95b390cbc62c60
Author: Heather <Heather@live.ru>
Date: Wed Aug 12 15:47:28 2015 +0400

fix headers and copyright lines

commit b9c11d9d44644f6a277de1f7af562de56e786675
Author: Sergei Trofimovich <siarheit@google.com>
Date: Sun Aug 9 10:37:52 2015 +0100

convert '# $Header: ' lines to '# $Id$'

The change was adopted when ::gentoo switched to git.

https://github.com/trofi/gentoo-qa/blob/master/check_header.sh

Signed-off-by: Sergei Trofimovich <siarheit@google.com>

commit 91928ac0d18f192e9c970cff91405cf0537e26c1
Author: Sergei Trofimovich <siarheit@google.com>
Date: Sun May 17 13:06:32 2015 +0100

dev-haskell/bio: port to ghc-7.10

Signed-off-by: Sergei Trofimovich <siarheit@google.com>

commit 7caba65cd543fbfef1c994cc43a84a5dec653ce7
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Thu Jul 24 18:07:32 2014 +0300

metadata.xml: from <maintainer> field in favour of <herd> one

Mangled by tiny tool:
https://github.com/trofi/gentoo-qa/blob/master/shrink_haskell_metadata.hs

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit 8843459a9c85d0fd4ced2c1249e2afd39ff34903
Author: Mark Wright <gienah@gentoo.org>
Date: Tue Jul 1 22:43:50 2014 +1000

2014 in bio

commit 05ccb6457e910ffea53368ed91b5336bc1df1271
Author: Alexander Vershilov <alexander.vershilov@gmail.com>
Date: Mon Apr 14 18:41:27 2014 +0400

dev-haskell/bitsyntax: fix quickcheck dep

commit c6f0e7265082c76d83d10b232ccf29ccdf9dba6a
Author: Alexander Vershilov <alexander.vershilov@gmail.com>
Date: Mon Apr 14 18:40:02 2014 +0400

dev-haskell/bio: fix quickcheck dep.

commit 731b7b8269219badba6157aa4be205c048105010
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Sat Sep 14 12:02:52 2013 +0300

dev-haskell/diagrams: bump up to 0.7

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit 744f9262865373ae0a18119ecaa0b62acd9adfdc
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Thu Sep 12 23:13:38 2013 +0300

dev-haskell/bio: removed old

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit cedc945024008b5942377c3225513dc292c5eaa7
Author: Alexander Vershilov <alexander.vershilov@gmail.com>
Date: Sun Jul 21 09:41:26 2013 +0400

dev-haskell/bio: bump up to 0.5.3

Signed-off-by: Alexander Vershilov <alexander.vershilov@gmail.com>

commit b43c786df83e1c48834bf309c2f411a2d9a6b63f
Author: Alexander Vershilov <alexander.vershilov@gmail.com>
Date: Sat Jul 20 10:12:25 2013 +0400

dev-haskell/bio: Q.A. update

commit 3319865a6fb63dc5af047acaa08b636581d33fb6
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Sat Mar 2 13:22:31 2013 +0300

dev-haskell/bio: allow binary-0.7

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit e2c7ce66cd9ad42a58822d62fc3432a7f4457395
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Sun Dec 2 21:29:55 2012 +0300

dev-haskell/bio: port to ghc-7.6

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit dbceb28414ad9ee46f4618902b49bfc072d394e4
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Thu Nov 15 01:20:39 2012 +0300

dev-haskell/bio: allow binary-0.6

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit 7db4e1b65c2de61d0028528402e5f4d4f1112cf1
Author: Alexander Vershilov <alexander.vershilov@gmail.com>
Date: Fri Sep 7 17:44:46 2012 +0400

big mirror update

commit 7247de2467f04d27506f3e6b2ea8e6c7d7ac2eb8
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Sat Jun 16 00:44:55 2012 +0300

dev-haskell/bio: fixe repoman QA: test? USE conditional in RDEPEND

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit 88bbb0224ca4d45e00f0f64b16b0c8e79dab66f1
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Fri Jun 15 03:11:07 2012 +0300

regenerated all Manifests to make use of 'thin' feature in one shot

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit 845c159ebdec6edf35abe73d11a70dc00cfd66cc
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Fri Mar 23 09:31:46 2012 +0300

dev-haskell/bio: added FEATUERS=test support. Renamed examples to avoid collision with dev-haskell/flower.

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit 097cb4586725fb673895f036e12c26edaefed10e
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Fri Mar 23 01:19:23 2012 +0300

dev-haskell/bio: fix binary upper depend

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>

commit 566c3f16a7f19103117c01c1eb76dc65a6ceae0d
Author: Sergei Trofimovich <slyfox@gentoo.org>
Date: Fri Mar 23 01:14:12 2012 +0300

dev-haskell/bio: new ebuild (asked by mmokrejs)

Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>