# Copyright 1999-2020 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2

EAPI=7

inherit R-packages

DESCRIPTION='Turn Bioconductor objects into tidy data frames'
KEYWORDS="~amd64"
SRC_URI="http://master.bioconductor.org/packages/3.9/bioc/src/contrib/biobroom_1.16.0.tar.gz"
LICENSE='LGPL-3+'

IUSE="${IUSE-} r_suggests_data_table r_suggests_edger r_suggests_ggplot2
	r_suggests_knitr r_suggests_limma r_suggests_magrittr r_suggests_plyr
	r_suggests_qvalue r_suggests_testthat"
R_SUGGESTS="
	r_suggests_data_table? ( sci-CRAN/data_table )
	r_suggests_edger? ( sci-BIOC/edgeR )
	r_suggests_ggplot2? ( sci-CRAN/ggplot2 )
	r_suggests_knitr? ( sci-CRAN/knitr )
	r_suggests_limma? ( sci-BIOC/limma )
	r_suggests_magrittr? ( sci-CRAN/magrittr )
	r_suggests_plyr? ( sci-CRAN/plyr )
	r_suggests_qvalue? ( sci-BIOC/qvalue )
	r_suggests_testthat? ( sci-CRAN/testthat )
"
DEPEND="sci-CRAN/tidyr
	sci-CRAN/broom
	sci-BIOC/Biobase
	sci-CRAN/dplyr
	>=dev-lang/R-3.0.0
"
RDEPEND="${DEPEND-} ${R_SUGGESTS-}"

_UNRESOLVED_PACKAGES=(
	'airway'
	'sci-BIOC/DESeq2'
	'sci-BIOC/GenomicRanges'
	'sci-BIOC/MSnbase'
	'sci-BIOC/SummarizedExperiment'
)