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dev-libs/boost

Boost Libraries for C++

sci-libs/lalapps

Applications for gravitational-wave data analysis with LIGO/Virgo

sci-libs/lalinference

Bayesian inference data-analysis package for LIGO and Virgo

sci-libs/tensorflow

Computation framework using data flow graphs for scalable machine learning

sci-libs/dbcsr

Distributed Block Compressed Sparse Row matrix library

app-crypt/johntheripper-jumbo

Fast password cracker, community enhanced version

dev-libs/maloc

Minimal Abstraction Layer for Object-oriented C/C++ programs

dev-libs/starpu

Unified runtime system for heterogeneous multicore architectures

dev-python/netcdf4

Python/numpy interface to the netCDF C library

media-gfx/tachyon

A portable, high performance parallel ray tracing system

media-gfx/netgen

Automatic 3d tetrahedral mesh generator

media-libs/Field3D

A library for storing voxel data

media-libs/vigra

C++ computer vision library emphasizing customizable algorithms and structures

sci-biology/mrbayes

Bayesian Inference of Phylogeny

sci-biology/clustalw-mpi

An MPI implemention of the ClustalW general purpose multiple alignment algorithm

sci-biology/hmmer

Sequence analysis using profile hidden Markov models

sci-biology/infernal

Inference of RNA alignments

sci-biology/mothur

Suite of algorithms for ecological bioinformatics

sci-biology/tree-puzzle

Maximum likelihood analysis for nucleotide, amino acid, and two-state data

sci-chemistry/mpqc

The Massively Parallel Quantum Chemistry Program

sci-chemistry/gromacs

The ultimate molecular dynamics simulation package

sci-libs/adolc

Automatic differentiation system for C/C++

sci-libs/arpack

Arnoldi package library to solve large scale eigenvalue problems

sci-libs/coinor-clp

COIN-OR linear programming solver

sci-libs/fftw

Fast C library for the Discrete Fourier Transform

sci-libs/gerris

Gerris Flow Solver

sci-libs/hdf5

General purpose library and file format for storing scientific data

sci-libs/hypre

Parallel matrix preconditioners library

sci-libs/ipopt

Interior-Point Optimizer for large-scale nonlinear optimization

sci-libs/lis

Library of Iterative Solvers for Linear Systems

sci-libs/lrslib

Reverse-search algorithm for vertex enumeration problems

sci-libs/mumps

MUltifrontal Massively Parallel sparse direct matrix Solver

sci-libs/punc

Portable Understructure for Numerical Computing

sci-libs/scotch

Software for graph, mesh and hypergraph partitioning

sci-libs/arborx

Library for performance portable algorithms for geometric search

sci-libs/cgnslib

CFD General Notation System standard library

sci-libs/dealii

Solving partial differential equations with the finite element method

sci-libs/flann

Fast approximate nearest neighbor searches in high dimensional spaces

sci-libs/gmsh

Three-dimensional finite element mesh generator

sci-libs/highfive

Header-only C++ interface for libhdf5

sci-libs/libsc

Support for parallel scientific applications

sci-libs/mathgl

Math Graphics Library

sci-libs/med

Library to store and exchange meshed data or computation results

sci-libs/netcdf

Scientific library and interface for array oriented data access

sci-libs/p4est

Scalable Algorithms for Parallel Adaptive Mesh Refinement on Forests of Octrees

sci-libs/pastix

Parallel solver for very large sparse linear systems

sci-libs/sundials

Suite of nonlinear solvers

sci-libs/vtk

The Visualization Toolkit

sci-mathematics/form

Symbolic Manipulation System

sci-mathematics/gretl

Regression, econometrics and time-series library