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dev-python/pyBigWig
quick access to and creation of bigWig files
dev-python/pybedtools
Use BED and GFF files from python using BEDtools
media-gfx/brlcad
Constructive solid geometry modeling system
sci-biology/imagej
Image Processing and Analysis in Java
sci-biology/proda
Multiple alignment of protein sequences with repeated and shuffled elements
sci-biology/bx-python
Library for rapid implementation of genome scale analyses
sci-biology/deeptools-intervals
Constructing interval trees with associated exon/annotation information
sci-biology/minimap2
splice-aware sequence aligner with SSE2 and SSE4.1
sci-libs/fox
A library designed to allow the easy use of XML from Fortran
sci-libs/gvar
Gaussian random variables.
sci-libs/nipy
Neuroimaging tools for Python
sci-libs/torchaudio
Data manipulation and transformation for audio signal processing
sci-mathematics/ripser
efficient computation of Vietoris-Rips persistence barcodes
sci-misc/pqdump
simple program to dump Parquet files
sci-physics/openmx
Material eXplorer
sci-physics/pyhepmc
A Pythonic wrapper for the HepMC3 C++ library.
net-im/webex
Cisco video conferencing and online meeting software
app-cdr/qpxtool
Enhanced (unofficial) qpxtool version.
net-vpn/wirespider
Wirespider allows distributing wireguard tunnels and routes
dev-db/sharphsql
Small & embebdded database engine witten in C#, port of the Hypersonic SQL v1.4 (HSQL) Java project
app-editors/mypad
mypad text editor
dev-dotnet/antlr3-runtime
The C# port of ANTLR 3 (Rubtime library)
dev-dotnet/apachemodmono-webadmnistration
API for managing Apache and mod-mono-server4
dev-dotnet/autofac-web
An addictive .NET IoC container
dev-dotnet/autofac-configuration
Configuration support for Autofac IoC
dev-dotnet/castle-core
including Castle DynamicProxy, Logging Services and DictionaryAdapter
dev-dotnet/buildtools
Build tools that are necessary for building the .NET Core projects
dev-dotnet/cecil
System.Reflection alternative to generate and inspect .NET executables/libraries
dev-dotnet/commandline
C# (and F#) command line parser with standardized *nix getopt style
dev-dotnet/dotnetzip-semverd
create, extract, or update zip files with C# (
dev-dotnet/html-agility-pack
Html Agility Pack is a C# parser for HTML, supports plain XPATH and XSLT
dev-dotnet/gentoo-net-sdk
Alternative build sequence with PkgConfig instead of NuGet
dev-dotnet/icsharpcode-texteditor
ICSharpCode.TextEditor library
dev-dotnet/microsoft-extensions-commandlineutils
Command line parsing and utilities for .NET Core and .NET Framework
dev-dotnet/msbuild-defaulttasks
default tasks for Microsoft Build Engine (MSBuild)
dev-dotnet/microsoft-net-sdk
'Microsoft.NET.Sdk' for msbuild
dev-dotnet/msbuildtasks
The MSBuild Community Tasks Project is an open source project for MSBuild tasks.
dev-dotnet/msbuild-tasks-api
msbuild libraries for writing Task-derived classes
dev-dotnet/netinfra
classes to store configuration of computers
dev-dotnet/ndepend-path
C# framework for paths operations: Absolute, Drive Letter, UNC, Relative, prefix
dev-dotnet/neosmart-collections
Collections in C# language for specific cases
dev-dotnet/nhibernate-core
NHibernate Object Relational Mapper
dev-dotnet/nhibernate-iesi-collections
C#, LinkedHashSet<T>, SynchronizedSet<T>, ReadOnlySet<T>
dev-dotnet/newtonsoft-json
Json.NET is a popular high-performance JSON framework for .NET
dev-dotnet/nhibernate
NHibernate Object Relational Mapper
dev-dotnet/npgsql
allows any program developed for .NET framework to access a PostgreSQL database
dev-dotnet/remotion-linq
Library to create full-featured LINQ providers.
dev-dotnet/remotion-linq-eagerfetching
Library to create full-featured LINQ providers (fetching).
dev-dotnet/pliant
modified Earley parser in C# inspired by the Marpa Parser project
dev-dotnet/slntools
library for merging .sln files, and cli-tool