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dev-python/cymbal

Add functionality missing from the python libclang bindings

dev-python/dandi-schema

Schemata for DANDI archive project

dev-python/dask-histogram

Histograms with task scheduling.

dev-python/datrie

Implements a topological sort algorithm

dev-python/dnaio

dnaio processes FASTQ, FASTA and uBAM files

dev-python/fiona

API for reading/writing vector geospatial data

dev-python/fslpy

The FSL Python Library

dev-python/geopandas

Python tools for geographic data

dev-python/gammapy

A Python package for gamma-ray astronomy

dev-python/gffpandas

Python library to Filter and sort GFF3 annotations

dev-python/hdbscan

A high performance implementation of HDBSCAN clustering.

dev-python/hdf5storage

Read/write Python types to/from HDF5 files, including MATLAB v7.3 MAT files

dev-python/hdmf-zarr

Zarr I/O backend for HDMF

dev-python/heudiconv

Flexible DICOM conversion to structured directory layouts

dev-python/hdmf

The Hierarchical Data Modeling Framework

dev-python/hist

Histogramming for analysis powered by boost-histogram

dev-python/interleave

Yield from multiple iterators as values become available

dev-python/holoviews

Make data analysis and visualization seamless and simple

dev-python/hopcroftkarp

python frontend for the fast ripser tda tool

dev-python/lazy_ops

Lazy transposing and slicing of h5py and Zarr data

dev-python/linesep

Handling lines with arbitrary separators

dev-python/methodtools

Expand functools features to methods, classmethods, staticmethods

dev-python/num2words

Modules to convert numbers to words.

dev-python/neo

Read and represent a wide range of neurophysiology file formats in Python

dev-python/nwb2bids

Next-generation file format (NGFF) for storing bioimaging data in the cloud

dev-python/numdifftools

Solves automatic numerical differentiation problems in one or more variables

dev-python/nwbinspector

Inspect NWB files for compliance with NWB Best Practices

dev-python/param

Make Python code clearer and more reliable by declaring Parameters

dev-python/plac

Parsing the Command Line the Easy Way

dev-python/persim

Distances and representations of persistence diagrams

dev-python/prov

W3C provenance data dodel library

dev-python/probeinterface

Python package to handle probe layout, geometry and wiring to device

dev-python/py2bit

Python library for accessing 2bit files

dev-python/pyBigWig

quick access to and creation of bigWig files

dev-python/pyaml-env

Parse YAML configuration with environment variables in Python

dev-python/pybedtools

Use BED and GFF files from python using BEDtools

dev-python/pyct

Python packaging Common Tasks

dev-python/pyfaidx

Efficient pythonic random access to fasta subsequences

dev-python/pynndescent

Fast approximate nearest-neighbour search via Nearest-Neighbour Descent

dev-python/pynwb

A Python API for working with Neurodata stored in the NWB Format

dev-python/pysolar

Collection of Python libraries for simulating the irradiation by the sun

dev-python/python-gantt

Draw Gantt charts from Python

dev-python/reretry

An easy-to-use but functional retry decorator in python

dev-python/pyzo

The Python IDE for scientific computing

dev-python/ripser

python frontend for the fast ripser tda tool

dev-python/snakemake

Make-like task language

dev-python/snakemake-interface-common

Common functions and classes for Snakemake and its plugins

dev-python/snakemake-interface-executor-plugins

Stable interface for interactions between Snakemake and its executor plugins

dev-python/snakemake-interface-logger-plugins

Snakemake Logger Plugin Interface

dev-python/snakemake-interface-report-plugins

The interface for Snakemake report plugins