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sci-chemistry/easychem

Chemical structure drawing program - focused on presentation

sci-chemistry/gromacs

The ultimate molecular dynamics simulation package

sci-chemistry/wxmacmolplt

Chemical 3D graphics program with GAMESS input builder

sci-chemistry/xds-bin

Software for processing single-crystal X-ray monochromatic diffraction data

sci-biology/fasta

FASTA is a DNA and Protein sequence alignment software package

sci-biology/mothur

A suite of algorithms for ecological bioinformatics

sci-biology/miranda

An algorithm for finding genomic targets for microRNAs

sci-biology/samtools

Utilities for analysing and manipulating the SAM/BAM alignment formats

sci-biology/infernal

Inference of RNA alignments

sci-biology/piler

Analysis of repetitive DNA found in genome sequences

sci-biology/fastdnaml

Maximum likelihood phylogenetic tree builder for DNA sequences

sci-biology/pals

Pairwise Aligner for Long Sequences

sci-biology/merlin

Statistical analysis of gene flow in pedigrees

sci-biology/pilercr

Analysis of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs)

dev-python/django

High-level Python web framework

net-p2p/nicotine+

Graphical client for the Soulseek peer to peer network written in Python

app-office/lyx

WYSIWYM (What You See Is What You Mean) document processor based on LaTeX

dev-util/diffuse

A graphical tool to compare and merge text files

dev-libs/uriparser

Strictly RFC 3986 compliant URI parsing library in C

sys-devel/patch

Utility to apply diffs to files

app-text/wiki2beamer

Tool to produce LaTeX Beamer code from wiki-like input

media-libs/libxspf

Playlist handling library

media-libs/freeverb3

Reverb and Impulse Response Convolution plug-ins (Audacious/JACK)

media-libs/libsfml

Simple and Fast Multimedia Library (SFML)

app-office/dia

Diagram/flowchart creation program

dev-util/xdelta

Computes changes between binary or text files and creates deltas

dev-libs/xapian-bindings

SWIG and JNI bindings for Xapian

dev-libs/dbus-glib

D-Bus bindings for glib

dev-libs/xapian

Xapian Probabilistic Information Retrieval library

x11-drivers/xf86-video-nouveau

Accelerated Open Source driver for nVidia cards

app-text/crm114

A powerful text processing tool, mainly used for spam filtering

gnome-extra/eiciel

ACL editor for GNOME, with Nautilus extension

x11-terms/tilda

A drop down terminal, similar to the consoles found in first person shooters

media-libs/exempi

Port of the Adobe XMP SDK to work on UNIX

x11-libs/libdrm

X.Org libdrm library

dev-python/dbus-python

Python bindings for the D-Bus messagebus

net-wireless/lorcon

A generic library for injecting 802.11 frames

net-libs/telepathy-glib

GLib bindings for the Telepathy D-Bus protocol

gnome-base/gnome-desktop

Library with common API for various GNOME modules

dev-python/python-distutils-extra

Gettext support, themed icons and scrollkeeper-based documentation in distutils

dev-python/vobject

Python package for parsing and generating vCard and vCalendar files

dev-lang/esco

Combine interpreter of esoteric languages

dev-lang/squirrel

A interpreted language mainly used for games

games-emulation/lxdream

An emulator for the Sega Dreamcast system

www-apache/mod_qos

A QOS module for the apache webserver

dev-util/uncrustify

C/C++/C#/D/Java/Pawn code indenter and beautifier

dev-util/schroot

Utility to execute commands in a chroot environment

dev-util/asn1c

Open Source ASN.1 Compiler

dev-util/gengetopt

Tool to write command line option parsing code for C programs

media-video/ushare

uShare is a UPnP (TM) A/V & DLNA Media Server