Search: gentoo-sources

net-nntp/nzbget

A command-line based binary newsgrabber supporting .nzb files

net-print/libcupsfilters

library for developing printing features, split out of cups-filters

net-proxy/squidguard

Combined filter, redirector and access controller plugin for Squid

net-wireless/gnuradio

Toolkit that provides signal processing blocks to implement software radios

sci-astronomy/missfits

Performs basic maintenance and packaging tasks on FITS files

sci-astronomy/psfex

Extracts models of the Point Spread Function from FITS images

sci-astronomy/wcstools

World Coordinate System library for astronomical FITS images

sci-astronomy/weightwatcher

Combine weight maps and polygon for astronomical images weighting

sci-biology/biogrep

Multithreaded tool for matching large sets of patterns against biosequence DBs

sci-biology/blat

The BLAST-Like Alignment Tool, a fast genomic sequence aligner

sci-biology/elph

Estimated Locations of Pattern Hits - Motif finder program

sci-biology/embassy-mse

EMBOSS integrated version of MSE - Multiple Sequence Screen Editor

sci-biology/fastx_toolkit

Tools for Short Read FASTA/FASTQ file processing

sci-biology/raxml

Sequential, Parallel & Distributed Inference of Large Phylogenetic Trees

sci-biology/recon

Automated de novo identification of repeat families from genomic sequences

sci-biology/bowtie

Popular short read aligner for Next-generation sequencing data

sci-biology/fasttree

Fast inference of approximately-maximum-likelihood phylogenetic trees

sci-chemistry/xds-bin

Software for processing single-crystal X-ray monochromatic diffraction data

sci-chemistry/autodock_vina

Program for drug discovery, molecular docking and virtual screening

sci-chemistry/gelemental

Periodic table viewer with detailed information on the chemical elements

sci-chemistry/raster3d

Generation high quality raster images of proteins or other molecules

sci-chemistry/MDAnalysis

A python library to analyze and manipulate molecular dynamics trajectories

sci-chemistry/mdtraj

Read, write and analyze MD trajectories with only a few lines of Python code

sci-electronics/fasthenry

Three dimensional inductance computation program, Whiteley Research version

sci-electronics/ghdl

Open-source analyzer, compiler, and simulator for VHDL 2008/93/87

sci-electronics/gtkwave

Wave viewer for LXT, LXT2, VZT, GHW and standard Verilog VCD/EVCD files

sci-electronics/systemc

A C++ based modeling platform for VLSI and system-level co-design

sci-geosciences/gshhg-gmt

Global Self-consistent, Hierarchical, High-resolution Geography Database

sci-geosciences/gpscorrelate

Tool for adjusting EXIF tags of your photos with a recorded GPS trace

sci-geosciences/foxtrotgps

Easy to use, fast and lightweight mapping application (fork of tangogps)

sci-geosciences/gshhs

Global Self-consistent, Hierarchical, High-resolution Shoreline programs

sci-geosciences/osmctools

A few really fast tools to convert, filter and update OSM data files

sci-libs/aotriton-bin

Ahead of Time (AOT) Triton Math Library (binary package)

sci-libs/ccolamd

Constrained Column approximate minimum degree ordering algorithm

sci-libs/camd

Library to order a sparse matrix prior to Cholesky factorization

sci-libs/cgcode

Conjugate gradient Codes for large sparse linear systems

sci-libs/ipopt

Interior-Point Optimizer for large-scale nonlinear optimization

sci-libs/libint

Matrix elements (integrals) evaluation over Cartesian Gaussian functions

sci-libs/linbox

C++ template library for integer and finite-field linear algebra

sci-libs/mumps

MUltifrontal Massively Parallel sparse direct matrix Solver

sci-libs/openlibm

High quality system independent, open source libm

sci-libs/qfits

ESO stand-alone C library offering easy access to FITS files

sci-libs/dealii

Solving partial differential equations with the finite element method

sci-libs/flexiblas

A BLAS and LAPACK wrapper library with runtime exchangable backends

sci-libs/lemon

C++ template static library of common data structures and algorithms

sci-libs/libecpint

Efficient evaluation of integrals over ab initio effective core potentials

sci-libs/lmfit

library for Levenberg-Marquardt least-squares minimization and curve fitting

sci-libs/netcdf

Scientific library and interface for array oriented data access

sci-libs/opencascade

Development platform for CAD/CAE, 3D surface/solid modeling and data exchange

sci-libs/rocPRIM

HIP parallel primitives for developing performant GPU-accelerated code on ROCm