# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)"

HOMEPAGE="https://github.com/BiomedSciAI/fuse-med-ml/"
LICENSE="Apache-2.0"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME//-/_}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME//-/_}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="all dev"
DEPENDENCIES=">=dev-python/numpy-1.18.5[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.2[${PYTHON_USEDEP}]
	>=dev-python/tqdm-4.52.0[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.5.4[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.3.3[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-1.4[${PYTHON_USEDEP}]
	>=dev-python/termcolor-1.1.0[${PYTHON_USEDEP}]
	dev-python/pycocotools[${PYTHON_USEDEP}]
	dev-python/pytorch-lightning[${PYTHON_USEDEP}]
	dev-python/torch[${PYTHON_USEDEP}]
	dev-python/torchvision[${PYTHON_USEDEP}]
	dev-python/tensorboard[${PYTHON_USEDEP}]
	dev-python/wget[${PYTHON_USEDEP}]
	dev-python/ipython[${PYTHON_USEDEP}]
	dev-python/h5py[${PYTHON_USEDEP}]
	dev-python/hdf5plugin[${PYTHON_USEDEP}]
	dev-python/deepdiff[${PYTHON_USEDEP}]
	dev-python/statsmodels[${PYTHON_USEDEP}]
	dev-python/xmlrunner[${PYTHON_USEDEP}]
	dev-python/paramiko[${PYTHON_USEDEP}]
	dev-python/tables[${PYTHON_USEDEP}]
	dev-python/psutil[${PYTHON_USEDEP}]
	dev-python/ipykernel[${PYTHON_USEDEP}]
	dev-python/hydra-core[${PYTHON_USEDEP}]
	dev-python/omegaconf[${PYTHON_USEDEP}]
	dev-python/nibabel[${PYTHON_USEDEP}]
	dev-python/vit-pytorch[${PYTHON_USEDEP}]
	dev-python/lifelines[${PYTHON_USEDEP}]
	dev-python/clearml[${PYTHON_USEDEP}]
	dev-python/x-transformers[${PYTHON_USEDEP}]
	dev-python/jsonargparse[${PYTHON_USEDEP}]
	dev-python/click[${PYTHON_USEDEP}]
	all? ( >=dev-python/scikit-image-0.17.2[${PYTHON_USEDEP}] )
	all? ( dev-python/SimpleITK[${PYTHON_USEDEP}] )
	all? ( dev-python/opencv-python[${PYTHON_USEDEP}] )
	all? ( dev-python/pydicom[${PYTHON_USEDEP}] )
	all? ( dev-python/MedPy[${PYTHON_USEDEP}] )
	all? ( dev-python/plotly[${PYTHON_USEDEP}] )
	all? ( dev-python/testbook[${PYTHON_USEDEP}] )
	all? ( ~dev-python/mypy-0.950[${PYTHON_USEDEP}] )
	all? ( dev-python/flake8[${PYTHON_USEDEP}] )
	all? ( ~dev-python/black-22.3.0[${PYTHON_USEDEP}] )
	all? ( dev-python/pre-commit[${PYTHON_USEDEP}] )
	all? ( dev-python/nb-clean[${PYTHON_USEDEP}] )
	dev? ( dev-python/testbook[${PYTHON_USEDEP}] )
	dev? ( ~dev-python/mypy-0.950[${PYTHON_USEDEP}] )
	dev? ( dev-python/flake8[${PYTHON_USEDEP}] )
	dev? ( ~dev-python/black-22.3.0[${PYTHON_USEDEP}] )
	dev? ( dev-python/pre-commit[${PYTHON_USEDEP}] )
	dev? ( dev-python/nb-clean[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"