# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Single-cell Cytometry Annotation Network"

HOMEPAGE="https://mics-lab.github.io/scyan/"
LICENSE="BSD"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="dev discovery hydra"
DEPENDENCIES="dev-python/anndata[${PYTHON_USEDEP}]
	dev-python/torch[${PYTHON_USEDEP}]
	dev-python/pytorch-lightning[${PYTHON_USEDEP}]
	>=dev-python/seaborn-0.12.2[${PYTHON_USEDEP}]
	dev-python/umap-learn[${PYTHON_USEDEP}]
	dev-python/llvmlite[${PYTHON_USEDEP}]
	dev-python/FlowUtils[${PYTHON_USEDEP}]
	dev-python/fcsparser[${PYTHON_USEDEP}]
	dev-python/fcswrite[${PYTHON_USEDEP}]
	hydra? ( dev-python/wandb[${PYTHON_USEDEP}] )
	hydra? ( dev-python/hydra-core[${PYTHON_USEDEP}] )
	hydra? ( dev-python/hydra-colorlog[${PYTHON_USEDEP}] )
	hydra? ( dev-python/hydra-optuna-sweeper[${PYTHON_USEDEP}] )
	dev? ( >=dev-python/pytest-7.1.2[${PYTHON_USEDEP}] )
	dev? ( >=dev-python/ipykernel-6.15.0[${PYTHON_USEDEP}] )
	dev? ( >=dev-python/ipywidgets-7.7.1[${PYTHON_USEDEP}] )
	dev? ( >=dev-python/isort-5.10.1[${PYTHON_USEDEP}] )
	dev? ( >=dev-python/black-22.6.0[${PYTHON_USEDEP}] )
	dev? ( >=dev-python/mkdocs-material-8.5.0[${PYTHON_USEDEP}] )
	dev? ( >=dev-python/mkdocstrings-0.19.0[${PYTHON_USEDEP}] )
	dev? ( >=dev-python/mkdocstrings-python-0.7.1[${PYTHON_USEDEP}] )
	dev? ( dev-python/mkdocs-jupyter[${PYTHON_USEDEP}] )
	discovery? ( dev-python/leidenalg[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"