# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="A collection of python scripts and functions for exploratory analysis of bioinformatic data in Python"

HOMEPAGE="https://github.com/ahs2202/biobookshelf"
LICENSE="GPL-3"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES=">=dev-python/ipython-8.30.0[${PYTHON_USEDEP}]
	>=dev-python/plotly-4.11.0[${PYTHON_USEDEP}]
	dev-python/plotnine[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.1.4[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.18.5[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	>=dev-python/intervaltree-3.1.0[${PYTHON_USEDEP}]
	dev-python/umap-learn[${PYTHON_USEDEP}]
	>=dev-python/regex-2020.10.15[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.4.1[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.3.2[${PYTHON_USEDEP}]
	dev-python/leidenalg[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-1.0.2[${PYTHON_USEDEP}]
	>=dev-python/seaborn-0.11.1[${PYTHON_USEDEP}]
	>=dev-python/statsmodels-0.12.1[${PYTHON_USEDEP}]
	>=dev-python/bitarray-1.6.1[${PYTHON_USEDEP}]
	>=dev-python/xmltodict-0.12.0[${PYTHON_USEDEP}]
	>=dev-python/beautifulsoup4-4.9.3[${PYTHON_USEDEP}]
	>=dev-python/parse-1.18.0[${PYTHON_USEDEP}]
	dev-python/UpSetPlot[${PYTHON_USEDEP}]
	dev-python/seqfold[${PYTHON_USEDEP}]
	dev-python/mappy[${PYTHON_USEDEP}]
	dev-python/primer3-py[${PYTHON_USEDEP}]
	dev-python/biopython[${PYTHON_USEDEP}]
	>=dev-python/h5py-2.1.0[${PYTHON_USEDEP}]
	>=dev-python/psutil-5.7.0[${PYTHON_USEDEP}]
	dev-python/zarr[${PYTHON_USEDEP}]
	>=dev-python/h5py-3.8.0[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"