# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Interactive visualization of spatial omics data with napari"

HOMEPAGE="https://github.com/scverse/napari-spatialdata.git"
LICENSE="BSD"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME//-/_}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME//-/_}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="all bermuda doc readthedocs test"
DEPENDENCIES="dev-python/anndata[${PYTHON_USEDEP}]
	dev-python/click[${PYTHON_USEDEP}]
	dev-python/cycler[${PYTHON_USEDEP}]
	dev-python/dask[${PYTHON_USEDEP}]
	dev-python/geopandas[${PYTHON_USEDEP}]
	dev-python/loguru[${PYTHON_USEDEP}]
	dev-python/matplotlib[${PYTHON_USEDEP}]
	dev-python/napari[${PYTHON_USEDEP}]
	dev-python/napari-matplotlib[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	dev-python/numpy[${PYTHON_USEDEP}]
	dev-python/packaging[${PYTHON_USEDEP}]
	dev-python/pandas[${PYTHON_USEDEP}]
	dev-python/pillow[${PYTHON_USEDEP}]
	dev-python/pyqtgraph[${PYTHON_USEDEP}]
	dev-python/qtpy[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/shapely[${PYTHON_USEDEP}]
	dev-python/scikit-learn[${PYTHON_USEDEP}]
	dev-python/spatialdata[${PYTHON_USEDEP}]
	dev-python/superqt[${PYTHON_USEDEP}]
	>=dev-python/typing-extensions-4.8.0[${PYTHON_USEDEP}]
	dev-python/vispy[${PYTHON_USEDEP}]
	dev-python/xarray[${PYTHON_USEDEP}]
	dev-python/xarray-datatree[${PYTHON_USEDEP}]
	bermuda? ( dev-python/bermuda[${PYTHON_USEDEP}] )
	test? ( dev-python/loguru[${PYTHON_USEDEP}] )
	test? ( dev-python/pytest[${PYTHON_USEDEP}] )
	test? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	test? ( dev-python/pytest-mock[${PYTHON_USEDEP}] )
	test? ( dev-python/pytest-qt[${PYTHON_USEDEP}] )
	test? ( dev-python/pre-commit[${PYTHON_USEDEP}] )
	doc? ( >=dev-python/sphinx-4.5[${PYTHON_USEDEP}] )
	doc? ( dev-python/sphinx-book-theme[${PYTHON_USEDEP}] )
	doc? ( dev-python/myst-parser[${PYTHON_USEDEP}] )
	doc? ( >=dev-python/sphinxcontrib-bibtex-1.0.0[${PYTHON_USEDEP}] )
	doc? ( >=dev-python/sphinx-autodoc-typehints-1.11.0[${PYTHON_USEDEP}] )
	doc? ( dev-python/sphinx-autobuild[${PYTHON_USEDEP}] )
	doc? ( dev-python/scanpydoc[${PYTHON_USEDEP}] )
	doc? ( dev-python/ipykernel[${PYTHON_USEDEP}] )
	doc? ( dev-python/ipython[${PYTHON_USEDEP}] )
	doc? ( dev-python/sphinx-copybutton[${PYTHON_USEDEP}] )
	doc? ( dev-python/sphinx-qt-documentation[${PYTHON_USEDEP}] )
	doc? ( dev-python/myst-nb[${PYTHON_USEDEP}] )
	doc? ( dev-python/squidpy[${PYTHON_USEDEP}] )
	readthedocs? ( >dev-python/pydantic-2.0[${PYTHON_USEDEP}] )
	all? ( dev-python/napari[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"