# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="General purpose stuff to generate and handle Hi-C data in its simplest form."

HOMEPAGE="https://github.com/koszullab/hicstuff"
LICENSE="BSD"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="mappy"
DEPENDENCIES="dev-python/numpy[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.5.0[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.4.0[${PYTHON_USEDEP}]
	dev-python/docopt[${PYTHON_USEDEP}]
	dev-python/biopython[${PYTHON_USEDEP}]
	dev-python/requests[${PYTHON_USEDEP}]
	dev-python/scikit-learn[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	dev-python/pyfastx[${PYTHON_USEDEP}]
	dev-python/cooler[${PYTHON_USEDEP}]
	dev-python/pairtools[${PYTHON_USEDEP}]
	mappy? ( dev-python/mappy[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"