# Copyright 1999-2020 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2

EAPI=7

inherit R-packages

DESCRIPTION='Clustering of Time Series Gene Expression data'
KEYWORDS="~amd64"
SRC_URI="http://master.bioconductor.org/packages/3.9/bioc/src/contrib/ctsGE_1.10.0.tar.gz"
LICENSE='GPL-2'

IUSE="${IUSE-} r_suggests_biocstyle r_suggests_dplyr r_suggests_dt
	r_suggests_geoquery r_suggests_knitr r_suggests_pander
	r_suggests_rmarkdown r_suggests_testthat"
R_SUGGESTS="
	r_suggests_biocstyle? ( sci-BIOC/BiocStyle )
	r_suggests_dplyr? ( sci-CRAN/dplyr )
	r_suggests_dt? ( sci-CRAN/DT )
	r_suggests_geoquery? ( sci-BIOC/GEOquery )
	r_suggests_knitr? ( sci-CRAN/knitr )
	r_suggests_pander? ( sci-CRAN/pander )
	r_suggests_rmarkdown? ( sci-CRAN/rmarkdown )
	r_suggests_testthat? ( sci-CRAN/testthat )
"
DEPEND=">=dev-lang/R-3.2
	sci-CRAN/shiny
	sci-CRAN/reshape2
	sci-BIOC/limma
	sci-CRAN/ccaPP
	sci-CRAN/ggplot2
	sci-CRAN/stringr
"
RDEPEND="${DEPEND-} ${R_SUGGESTS-}"